Assay Report Card

Basic Information

ID: ALA3888196

Type: Binding

Description: HDAC Activity Assay: HDAC assay is performed using fluorescently-labeled acetylated substrate, which comprises an acetylated lysine side chain. After incubation with HDAC, deacetylation of the substrate sensitizes the substrate such that, in a second step, treatment with the detection enzyme produces a fluorophore. HDACs 1 and 6 were expressed as full length fusion proteins. Purified proteins were incubated with 50 μM fluorescently-labeled acetylated peptide substrate and test compound for 2 hours at RT in HDAC assay buffer containing 50 mM Tris-HCl (pH 8.0), 137 mM NaCl, 2.7 mM KCl, 1 mM MgCl2, 1% DMSO, and 1% BSA. Reactions were terminated by the addition of the Developer after 2 hours, and the development of fluorescence signal, which was relative to the amount of deacetylated peptide, was monitored by time-course measurement of EnVision (PerkinElmer). The HDAC activity was estimated from the slope of time-course measurement of the fluorescence intensity.

Organism: Homo sapiens

Activity Charts

Compound Summary

Parent Molecular WeightALogPPolar Surface Area
721.888.628.62
335.412.802.80
207.272.712.71
280.333.123.12
222.291.651.65
228.251.791.79
250.342.422.42
249.313.893.89
337.422.912.91
214.221.871.87
318.384.144.14
269.260.990.99
269.260.990.99
270.332.462.46
387.461.901.90
220.271.401.40
281.312.512.51
205.262.462.46
303.363.993.99
309.373.333.33
394.522.442.44
267.292.202.20
366.422.272.27
264.331.421.42
249.312.342.34
250.302.792.79
356.434.404.40
338.412.312.31
235.333.203.20
256.302.542.54
266.302.812.81
202.211.801.80
309.372.582.58
217.231.051.05
294.353.433.43
216.241.661.66
280.333.123.12
270.332.462.46
249.312.342.34
264.331.421.42
254.251.741.74
254.251.741.74