ID: ALA3888198
Type: Binding
Description: HDAC Activity Assay: HDAC assay is performed using fluorescently-labeled acetylated substrate, which comprises an acetylated lysine side chain. After incubation with HDAC, deacetylation of the substrate sensitizes the substrate such that, in a second step, treatment with the detection enzyme produces a fluorophore. HDACs 1 and 6 were expressed as full length fusion proteins. Purified proteins were incubated with 50 μM fluorescently-labeled acetylated peptide substrate and test compound for 2 hours at RT in HDAC assay buffer containing 50 mM Tris-HCl (pH 8.0), 137 mM NaCl, 2.7 mM KCl, 1 mM MgCl2, 1% DMSO, and 1% BSA. Reactions were terminated by the addition of the Developer after 2 hours, and the development of fluorescence signal, which was relative to the amount of deacetylated peptide, was monitored by time-course measurement of EnVision (PerkinElmer). The HDAC activity was estimated from the slope of time-course measurement of the fluorescence intensity.
Organism: Homo sapiens
Bioactivity
Activity Types for Assay ALA3888198
IC50
Parent Molecular Weight | ALogP | Polar Surface Area |
---|---|---|
721.88 | 8.62 | 8.62 |
335.41 | 2.80 | 2.80 |
207.27 | 2.71 | 2.71 |
280.33 | 3.12 | 3.12 |
222.29 | 1.65 | 1.65 |
228.25 | 1.79 | 1.79 |
250.34 | 2.42 | 2.42 |
249.31 | 3.89 | 3.89 |
337.42 | 2.91 | 2.91 |
214.22 | 1.87 | 1.87 |
318.38 | 4.14 | 4.14 |
269.26 | 0.99 | 0.99 |
269.26 | 0.99 | 0.99 |
270.33 | 2.46 | 2.46 |
387.46 | 1.90 | 1.90 |
220.27 | 1.40 | 1.40 |
281.31 | 2.51 | 2.51 |
205.26 | 2.46 | 2.46 |
303.36 | 3.99 | 3.99 |
309.37 | 3.33 | 3.33 |
394.52 | 2.44 | 2.44 |
267.29 | 2.20 | 2.20 |
366.42 | 2.27 | 2.27 |
264.33 | 1.42 | 1.42 |
249.31 | 2.34 | 2.34 |
250.30 | 2.79 | 2.79 |
356.43 | 4.40 | 4.40 |
338.41 | 2.31 | 2.31 |
235.33 | 3.20 | 3.20 |
256.30 | 2.54 | 2.54 |
266.30 | 2.81 | 2.81 |
202.21 | 1.80 | 1.80 |
309.37 | 2.58 | 2.58 |
217.23 | 1.05 | 1.05 |
294.35 | 3.43 | 3.43 |
216.24 | 1.66 | 1.66 |
280.33 | 3.12 | 3.12 |
270.33 | 2.46 | 2.46 |
249.31 | 2.34 | 2.34 |
264.33 | 1.42 | 1.42 |
254.25 | 1.74 | 1.74 |
254.25 | 1.74 | 1.74 |