ID: ALA3888313
Type: Binding
Description: HCMV Polymerase LANCE TR-FRET Assay: The assay conditions are the following: 10 mM HEPES pH 7.5, 25 mM KCl, 7.5 mM NaCl, 5 mM MgCl2, 0.2 mg BSA/mL, 1 mM TCEP, 1.5% glycerol, 5% DMSO, 235 nM dATP, 350 nM dCTP, 350 nM dGTP, 235 nM dTTP, 12 nM biotin-16-dUTP, 23.5 nM Dig-primer/template, 2 nM GST-UL54. The assay volume is 10 μL. Each reagent is added as follow: 4 μL a+3 μL b+3 μL c; a: compound diluted in compound dilution buffer to obtain 12.5% DMSO; b: enzyme (GST-UL54) in 10 mM Hepes pH 7.5, 25 mM KCl, 5 mM MgCl2, 25 mM NaCl, 5% Glycerol, 0.67 mg BSA/mL, 1 mM TCEP w/o DMSO (2 nM GST-UL54 is present in the assay); c: substrate in 10 mM HEPES pH 7.5, 25 mM KCl, 5 mM MgCl2, 1 mM TCEP, 783 nM dATP, 1166 nM dCTP, 1166 nM dGTP, 783 nM dTTP, 40 nM biotin-16-dUTP, 78 nM Dig-primer (5'-/Dig/AGC TCG TTT AGT GAA CC-3')/template (5'-GAG GTC AAA ACA GCG TGG ATG GCG TCT CCA GGC GAT CTG ACG GTT CAC TAA ACG AGC T-3') w/o DMSO. The primer and template are annealed in 10 mM Tris-HCl pH 7.5, 50 mM NaCl at a respective concentration of 50 μM. They are incubated at 95 °C. for 5 min in a dry batch block. The block is removed from the dry bath and allowed to cool to RT. Aliquots are made and stored at −20 °C. To perform the assay, 3 μL of the enzyme solution is added to columns 2-12 and 14-24. The enzyme is substituted by the blank solution (b solution without enzyme) for columns 1 and 13 (blanks). The plate is centrifuged at 200×g for 30 sec. 3 μL of substrate solution is added to each well. The plate is centrifuged at 200×g for 30 sec. Plates are incubated at 37 °C. for 30 min. 5 μL of conjugate solution is added (25 mM Hepes pH 7.5, 0.1 M NaCl, 0.25% Tween-20, 1 mg/mL BSA, 12 mM EDTA, 24 nM Sreptavidin-APC, 342 ng/mL Anti-Dig-Europium). The plates are incubated at RT for at least 120 min. The signal is read on the Envision plate reader (Perkin-Elmer) or equivalent.
Bioactivity
Activity Types for Assay ALA3888313
IC50
Parent Molecular Weight | ALogP | Polar Surface Area |
---|---|---|
525.99 | 2.37 | 2.37 |
506.95 | 2.03 | 2.03 |
529.98 | 1.04 | 1.04 |
499.51 | 2.16 | 2.16 |
537.02 | 2.85 | 2.85 |
548.05 | 3.63 | 3.63 |
552.99 | 2.96 | 2.96 |
605.06 | 3.18 | 3.18 |
598.07 | 2.90 | 2.90 |
532.00 | 2.89 | 2.89 |
506.95 | 2.69 | 2.69 |
574.04 | 2.57 | 2.57 |
580.11 | 4.60 | 4.60 |
549.03 | 3.44 | 3.44 |
535.99 | 1.56 | 1.56 |
590.08 | 2.43 | 2.43 |
565.03 | 2.23 | 2.23 |
565.07 | 2.56 | 2.56 |
488.95 | 1.24 | 1.24 |
533.03 | 3.56 | 3.56 |
468.90 | 1.91 | 1.91 |
499.93 | 1.79 | 1.79 |
512.01 | 2.91 | 2.91 |
454.91 | 1.96 | 1.96 |
453.93 | 1.79 | 1.79 |
436.90 | 2.60 | 2.60 |
522.05 | 3.10 | 3.10 |
469.93 | 1.61 | 1.61 |
533.03 | 3.17 | 3.17 |
522.97 | 2.95 | 2.95 |
532.00 | 4.04 | 4.04 |
526.04 | 3.03 | 3.03 |
481.00 | 3.97 | 3.97 |
540.96 | 2.90 | 2.90 |
552.03 | 2.51 | 2.51 |
519.99 | 3.14 | 3.14 |
537.98 | 2.53 | 2.53 |