ID: ALA2063395

Max Phase: Preclinical

Molecular Formula: C26H37N5O4

Molecular Weight: 483.61

Molecule Type: Small molecule

Associated Items:

Representations

Canonical SMILES:  CCC[C@@H]1NC(=O)[C@H](C)NC(=O)C[C@H](CC(C)C)NC(=O)[C@H](Cc2c[nH]c3ccccc23)NC1=O

Standard InChI:  InChI=1S/C26H37N5O4/c1-5-8-21-25(34)31-22(12-17-14-27-20-10-7-6-9-19(17)20)26(35)29-18(11-15(2)3)13-23(32)28-16(4)24(33)30-21/h6-7,9-10,14-16,18,21-22,27H,5,8,11-13H2,1-4H3,(H,28,32)(H,29,35)(H,30,33)(H,31,34)/t16-,18-,21-,22-/m0/s1

Standard InChI Key:  LHUGWXWDPVKZOS-DBXVSBKESA-N

Associated Targets(Human)

HEK293 82097 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

MCF7 126967 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

HeLa 62764 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Jurkat 10389 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

HL-60 67320 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Histone deacetylase 6 20808 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Histone deacetylase 3/Nuclear receptor corepressor 2 (HDAC3/NCoR2) 735 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Histone deacetylase 2 3971 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Histone deacetylase 1 10854 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Histone deacetylase 3 3654 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Histone deacetylase 8 4516 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: Small moleculeTopical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Properties

Molecular Weight: 483.61Molecular Weight (Monoisotopic): 483.2846AlogP: 1.92#Rotatable Bonds: 6
Polar Surface Area: 132.19Molecular Species: NEUTRALHBA: 4HBD: 5
#RO5 Violations: 0HBA (Lipinski): 9HBD (Lipinski): 5#RO5 Violations (Lipinski): 0
CX Acidic pKa: 11.06CX Basic pKa: CX LogP: 1.92CX LogD: 1.91
Aromatic Rings: 2Heavy Atoms: 35QED Weighted: 0.43Np Likeness Score: 1.07

References

1. Vickers CJ, Olsen CA, Leman LJ, Ghadiri MR..  (2012)  Discovery of HDAC Inhibitors That Lack an Active Site Zn(2+)-Binding Functional Group.,  (6): [PMID:24900500] [10.1021/ml300081u]
2. Lai JI, Leman LJ, Ku S, Vickers CJ, Olsen CA, Montero A, Ghadiri MR, Gottesfeld JM..  (2017)  Cyclic tetrapeptide HDAC inhibitors as potential therapeutics for spinal muscular atrophy: Screening with iPSC-derived neuronal cells.,  27  (15): [PMID:28648462] [10.1016/j.bmcl.2017.06.027]

Source