ID: ALA4209041

Max Phase: Preclinical

Molecular Formula: C27H22ClN5O4

Molecular Weight: 515.96

Molecule Type: Small molecule

Associated Items:

Representations

Canonical SMILES:  Cc1cc(NC(=O)c2ccc(CN3C(=O)c4ccc(Cl)cc4NC(=O)[C@H]3Cc3cccnc3)cc2)no1

Standard InChI:  InChI=1S/C27H22ClN5O4/c1-16-11-24(32-37-16)31-25(34)19-6-4-17(5-7-19)15-33-23(12-18-3-2-10-29-14-18)26(35)30-22-13-20(28)8-9-21(22)27(33)36/h2-11,13-14,23H,12,15H2,1H3,(H,30,35)(H,31,32,34)/t23-/m1/s1

Standard InChI Key:  KOGNICNIYSBIDZ-HSZRJFAPSA-N

Associated Targets(non-human)

Toxin B 126 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Toxin A 45 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Clostridioides difficile 2968 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Limosilactobacillus reuteri 118 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Bifidobacterium longum 298 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Bacteroides fragilis 1445 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: Small moleculeTopical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Properties

Molecular Weight: 515.96Molecular Weight (Monoisotopic): 515.1360AlogP: 4.49#Rotatable Bonds: 6
Polar Surface Area: 117.43Molecular Species: NEUTRALHBA: 6HBD: 2
#RO5 Violations: 1HBA (Lipinski): 9HBD (Lipinski): 2#RO5 Violations (Lipinski): 1
CX Acidic pKa: 11.77CX Basic pKa: 4.92CX LogP: 4.45CX LogD: 4.45
Aromatic Rings: 4Heavy Atoms: 37QED Weighted: 0.39Np Likeness Score: -1.35

References

1. Letourneau JJ, Stroke IL, Hilbert DW, Sturzenbecker LJ, Marinelli BA, Quintero JG, Sabalski J, Ma L, Diller DJ, Stein PD, Webb ML..  (2018)  Identification and initial optimization of inhibitors of Clostridium difficile (C. difficile) toxin B (TcdB).,  28  (4): [PMID:29331267] [10.1016/j.bmcl.2018.01.005]

Source