3-(2-{(S)-4-[3-(1H-Benzoimidazol-2-ylamino)-propyl]-2,5-dioxo-imidazolidin-1-yl}-acetylamino)-2-benzyloxycarbonylamino-propionic acid anion

ID: ALA1160228

PubChem CID: 44296868

Max Phase: Preclinical

Molecular Formula: C26H29N7O7

Molecular Weight: 551.56

Molecule Type: Small molecule

This compound is available for customization.

Associated Items:

Names and Identifiers

Canonical SMILES:  O=C(CN1C(=O)N[C@@H](CCCNc2nc3ccccc3[nH]2)C1=O)NCC(NC(=O)OCc1ccccc1)C(=O)O

Standard InChI:  InChI=1S/C26H29N7O7/c34-21(28-13-20(23(36)37)32-26(39)40-15-16-7-2-1-3-8-16)14-33-22(35)19(31-25(33)38)11-6-12-27-24-29-17-9-4-5-10-18(17)30-24/h1-5,7-10,19-20H,6,11-15H2,(H,28,34)(H,31,38)(H,32,39)(H,36,37)(H2,27,29,30)/t19-,20?/m0/s1

Standard InChI Key:  UPMBUMAUUSFEIL-XJDOXCRVSA-N

Molfile:  

     RDKit          2D

 40 43  0  0  0  0  0  0  0  0999 V2000
    5.4917   -0.5917    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.2375   -1.3792    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8250   -0.1042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4125   -1.3792    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.6500   -0.7750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5625    0.0500    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1000   -1.1125    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.1625   -0.5917    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.0750   -0.9292    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.4750   -1.2250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2417   -0.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.6875   -1.4875    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.2792   -0.3375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2375    0.2208    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6583   -0.5000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8875   -0.8917    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7250   -2.0500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8250    0.7208    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.6750   -0.6375    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    8.2875   -1.1875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0167    0.1333    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.6417   -0.4167    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.6250    0.4250    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.3625   -1.1875    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   11.0875   -1.7750    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.7167   -1.7000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.8750   -1.5167    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.4875   -2.0667    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3750   -0.3375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6500    0.9333    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4750   -0.5000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9750   -0.6375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.3125   -2.8750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.2625   -1.8125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7625   -0.8917    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8875    0.2125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4750    0.9333    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.9250   -3.4250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.8750   -2.3542    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.7125   -3.1667    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  0
  3  1  1  0
  4  2  1  0
  5 24  1  0
  6  5  2  0
  7  5  1  0
  8  3  1  0
  9 20  1  0
 10 12  1  0
 11  9  1  0
 12  9  1  0
 13  1  1  0
 14  6  1  0
 15  7  1  0
 16 13  1  0
 17  2  2  0
 18  3  2  0
 19 16  1  0
 20 19  1  0
 21 11  1  0
 22 10  2  0
 23 11  2  0
 24 32  1  0
 25 10  1  0
 26 16  2  0
 27 25  1  0
 28 27  1  0
  8 29  1  1
 30 14  1  0
 31 15  1  0
 32 35  1  0
 33 28  2  0
 34 28  1  0
 35 29  1  0
 36 31  2  0
 37 30  2  0
 38 33  1  0
 39 34  2  0
 40 39  1  0
  8  4  1  0
 15 14  2  0
 37 36  1  0
 38 40  2  0
M  END

Associated Targets(Human)

ITGB3 Tclin Integrin alpha-IIb/beta-3 (3481 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
ITGB3 Tclin Integrin alpha-V/beta-3 (2708 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: Small moleculeTopical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Biocomponents

Calculated Properties

Molecular Weight: 551.56Molecular Weight (Monoisotopic): 551.2128AlogP: 1.17#Rotatable Bonds: 13
Polar Surface Area: 194.85Molecular Species: ACIDHBA: 8HBD: 6
#RO5 Violations: 2HBA (Lipinski): 14HBD (Lipinski): 6#RO5 Violations (Lipinski): 3
CX Acidic pKa: 3.42CX Basic pKa: 6.98CX LogP: -0.89CX LogD: -1.44
Aromatic Rings: 3Heavy Atoms: 40QED Weighted: 0.13Np Likeness Score: -0.88

References

1. Peyman A, Wehner V, Knolle J, Stilz HU, Breipohl G, Scheunemann KH, Carniato D, Ruxer JM, Gourvest JF, Gadek TR, Bodary S..  (2000)  RGD mimetics containing a central hydantoin scaffold: alpkha(v)beta3 vs alpha(IIb)beta3 selectivity requirements.,  10  (2): [PMID:10673106] [10.1016/s0960-894x(99)00661-7]

Source