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Cyclic urea 2,4-diazepin-3-one analogue ID: ALA1160812
PubChem CID: 46905379
Max Phase: Preclinical
Molecular Formula: C27H32F6N6O7S
Molecular Weight: 470.60
Molecule Type: Small molecule
Associated Items:
Names and Identifiers Canonical SMILES: N=C(N)c1cccc(N2CCCCN(C3CCN(S(=O)(=O)c4ccc(N)cc4)CC3)C2=O)c1.O=C(O)C(F)(F)F.O=C(O)C(F)(F)F
Standard InChI: InChI=1S/C23H30N6O3S.2C2HF3O2/c24-18-6-8-21(9-7-18)33(31,32)27-14-10-19(11-15-27)28-12-1-2-13-29(23(28)30)20-5-3-4-17(16-20)22(25)26;2*3-2(4,5)1(6)7/h3-9,16,19H,1-2,10-15,24H2,(H3,25,26);2*(H,6,7)
Standard InChI Key: HWXUFOJJKOLHTH-UHFFFAOYSA-N
Molfile:
RDKit 2D
47 48 0 0 0 0 0 0 0 0999 V2000
-1.8083 1.8958 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-1.8083 1.3208 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-1.3125 1.0333 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
-2.3125 1.0333 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
-1.8083 2.3750 0.0000 F 0 0 0 0 0 0 0 0 0 0 0 0
-1.3833 2.2458 0.0000 F 0 0 0 0 0 0 0 0 0 0 0 0
-2.2333 2.2458 0.0000 F 0 0 0 0 0 0 0 0 0 0 0 0
1.6125 -1.9500 0.0000 S 0 0 0 0 0 0 0 0 0 0 0 0
-0.7000 -0.5250 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-1.2208 -0.2167 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
-0.1375 -0.3125 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
1.1750 -1.5417 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
-1.7375 -0.5292 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-3.2958 -0.2292 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-3.2958 0.3708 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
2.0375 -2.3750 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
0.3000 -0.7167 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
2.1875 -1.7792 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
1.4750 -2.5375 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
-2.2583 -0.2292 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-2.7750 -0.5292 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.7500 -1.1250 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
0.6000 -1.7125 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
1.3125 -0.9542 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
0.1625 -1.3125 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
0.8750 -0.5417 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
1.8750 -2.9500 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
2.6042 -2.2167 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-3.8125 -0.5292 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
-1.3125 0.3750 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
0.0375 0.2708 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
2.8750 -3.2250 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
3.3000 -3.6417 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
2.3000 -3.3750 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
3.0292 -2.6417 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-1.7375 -1.1292 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-2.7750 -1.1292 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-2.2583 -1.4292 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.8958 0.8125 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
-0.2958 0.7625 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
3.6792 -0.0917 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
3.6792 -0.6667 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
4.1750 -0.9542 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
3.1750 -0.9542 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
3.6792 0.3875 0.0000 F 0 0 0 0 0 0 0 0 0 0 0 0
4.1042 0.2583 0.0000 F 0 0 0 0 0 0 0 0 0 0 0 0
3.2542 0.2583 0.0000 F 0 0 0 0 0 0 0 0 0 0 0 0
2 1 1 0
3 2 1 0
4 2 2 0
5 1 1 0
6 1 1 0
7 1 1 0
9 11 1 0
10 9 1 0
11 17 1 0
12 8 1 0
13 10 1 0
14 21 1 0
15 14 2 0
16 8 1 0
17 26 1 0
18 8 2 0
19 8 2 0
20 13 2 0
21 20 1 0
22 9 2 0
23 12 1 0
24 12 1 0
25 23 1 0
26 24 1 0
27 16 2 0
28 16 1 0
29 14 1 0
30 10 1 0
31 11 1 0
32 35 1 0
33 32 1 0
34 27 1 0
35 28 2 0
36 13 1 0
37 38 1 0
38 36 2 0
39 40 1 0
40 31 1 0
34 32 2 0
17 25 1 0
30 39 1 0
21 37 2 0
42 41 1 0
43 42 1 0
44 42 2 0
45 41 1 0
46 41 1 0
47 41 1 0
M END Associated Targets(Human) Molecule Features Natural Product: NoOral: NoChemical Probe: NoParenteral: NoMolecule Type: Small moleculeTopical: NoFirst In Class: NoBlack Box: NoChirality: NoAvailability: NoProdrug: No
Drug Indications MESH ID MESH Heading EFO IDs EFO Terms Max Phase for Indication References
Mechanisms of Action Mechanism of Action Action Type target ID Target Name Target Type Target Organism Binding Site Name References
Calculated Properties Molecular Weight: 470.60Molecular Weight (Monoisotopic): 470.2100AlogP: 2.43#Rotatable Bonds: 5Polar Surface Area: 136.82Molecular Species: BASEHBA: 5HBD: 3#RO5 Violations: ┄HBA (Lipinski): 9HBD (Lipinski): 5#RO5 Violations (Lipinski): ┄CX Acidic pKa: ┄CX Basic pKa: 11.17CX LogP: 0.55CX LogD: -1.85Aromatic Rings: 2Heavy Atoms: 33QED Weighted: 0.35Np Likeness Score: -1.38
References 1. Galemmo RA, Wells BL, Rossi KA, Alexander RS, Dominguez C, Maduskuie TP, Stouten PF, Wright MR, Aungst BJ, Wong PC, Knabb RM, Wexler RR.. (2000) The de novo design and synthesis of cyclic urea inhibitors of factor Xa: optimization of the S4 ligand., 10 (3): [PMID:10698459 ] [10.1016/s0960-894x(99)00688-5 ]