3-(Naphthalen-2-ylmethylthio)thiophene-2-carboxylic acid

ID: ALA1910881

PubChem CID: 54757809

Max Phase: Preclinical

Molecular Formula: C16H12O2S2

Molecular Weight: 300.40

Molecule Type: Small molecule

Names and Identifiers

Canonical SMILES:  O=C(O)c1sccc1SCc1ccc2ccccc2c1

Standard InChI:  InChI=1S/C16H12O2S2/c17-16(18)15-14(7-8-19-15)20-10-11-5-6-12-3-1-2-4-13(12)9-11/h1-9H,10H2,(H,17,18)

Standard InChI Key:  KGAVOXKNHSTTFM-UHFFFAOYSA-N

Molfile:  

     RDKit          2D

 20 22  0  0  0  0  0  0  0  0999 V2000
    7.8524   -9.3499    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    8.5303   -8.8695    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2810   -8.0789    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4519   -8.0711    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1877   -8.8570    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3123   -9.1325    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.4755   -9.9412    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.9310   -8.5868    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.7723   -7.4157    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    9.5972   -7.4228    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0158   -6.7119    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.8384   -6.7209    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0212   -5.2874    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.6064   -5.9981    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.8505   -5.2918    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.2558   -6.0112    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.0797   -6.0189    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.4991   -5.3078    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.0887   -4.5877    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.2662   -4.5836    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  9 10  1  0
  5  1  1  0
 10 11  1  0
  2  3  2  0
 11 12  2  0
 12 16  1  0
  2  6  1  0
 15 13  1  0
 13 14  2  0
 14 11  1  0
  6  7  2  0
  1  2  1  0
 15 16  1  0
  6  8  1  0
 16 17  2  0
  3  4  1  0
 17 18  1  0
  3  9  1  0
 18 19  2  0
  4  5  2  0
 19 20  1  0
 20 15  2  0
M  END

Alternative Forms

1. Parent:

   

   ALA1910881

   3-(Naphthalen-2-ylmethylsulfanyl)thiophene-2-carboxylic acid

Molecule Features

Natural Product: No

Oral: No

Chemical Probe: No

Parenteral: No

Molecule Type: Small molecule

Topical: No

First In Class: No

Black Box: No

Chirality: No

Availability: No

Prodrug: No

Calculated Properties

Molecular Weight: 300.40

Molecular Weight (Monoisotopic): 300.0279

AlogP: 4.89

#Rotatable Bonds: 4

Polar Surface Area: 37.30

Molecular Species: ACID

HBA: 3

HBD: 1

#RO5 Violations: ┄

HBA (Lipinski): 2

HBD (Lipinski): 1

#RO5 Violations (Lipinski): ┄

CX Acidic pKa: 3.27

CX Basic pKa: ┄

CX LogP: 4.78

CX LogD: 1.35

Aromatic Rings: 3

Heavy Atoms: 20

QED Weighted: 0.70

Np Likeness Score: -1.36

References

1. Sheriff S, Beno BR, Zhai W, Kostich WA, McDonnell PA, Kish K, Goldfarb V, Gao M, Kiefer SE, Yanchunas J, Huang Y, Shi S, Zhu S, Dzierba C, Bronson J, Macor JE, Appiah KK, Westphal RS, O'Connell J, Gerritz SW..  (2011)  Small molecule receptor protein tyrosine phosphatase γ (RPTPγ) ligands that inhibit phosphatase activity via perturbation of the tryptophan-proline-aspartate (WPD) loop.,  54  (19): [PMID:21882820] [10.1021/jm2003766]

Source

Source(1):

• Scientific Literature