Trans-1-(6-(6-(1-((S)-2-(2-(2-amino-2-oxoethyl)-2-((2R,3R)-3-(ethoxycarbonyl)oxirane-2-carbonyl)hydrazinecarbonyl)pyrrolidine-1-carbonyl)cyclopropylamino)-6-oxohexylamino)-6-oxohexyl)-2-(-5-(1-ethyl-3,3-dimethyl-5-sulfo-3H-indolium-2-yl)penta-2,4-dienylidene)-3,3-dimethylindoline-5-sulfonate

ID: ALA1950288

PubChem CID: 57390949

Max Phase: Preclinical

Molecular Formula: C56H74N8O15S2

Molecular Weight: 1163.38

Molecule Type: Small molecule

Associated Items:

This compound is not in our inventory system

Names and Identifiers

Canonical SMILES:  CCOC(=O)[C@@H]1O[C@H]1C(=O)N(CC(N)=O)NC(=O)[C@@H]1CCCN1C(=O)C1(NC(=O)CCCCCNC(=O)CCCCCN2/C(=C/C=C/C=C/C3=[N+](CC)c4ccc(S(=O)(=O)O)cc4C3(C)C)C(C)(C)c3cc(S(=O)(=O)[O-])ccc32)CC1

Standard InChI:  InChI=1S/C56H74N8O15S2/c1-7-61-40-26-24-36(80(72,73)74)33-38(40)54(3,4)43(61)20-12-9-13-21-44-55(5,6)39-34-37(81(75,76)77)25-27-41(39)62(44)31-17-11-15-22-46(66)58-30-16-10-14-23-47(67)59-56(28-29-56)53(71)63-32-18-19-42(63)50(68)60-64(35-45(57)65)51(69)48-49(79-48)52(70)78-8-2/h9,12-13,20-21,24-27,33-34,42,48-49H,7-8,10-11,14-19,22-23,28-32,35H2,1-6H3,(H6-,57,58,59,60,65,66,67,68,72,73,74,75,76,77)/t42-,48+,49+/m0/s1

Standard InChI Key:  BFWFEMREEKAKFM-FVKJYKRZSA-N

Molfile:  

     RDKit          2D

 81 87  0  0  0  0  0  0  0  0999 V2000
   12.7544   -1.0508    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.4811   -0.6601    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.7786   -0.2246    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8869   -3.0181    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.1017   -2.2211    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6845   -2.8056    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7672   -1.3962    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5340   -0.6004    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3406   -0.7974    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3078   -1.9767    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2969   -1.1516    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5730   -1.5435    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0773   -0.8849    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3999   -0.1285    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2178   -0.0293    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7123   -0.6927    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3871   -1.4466    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6227   -0.6763    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1262   -1.0225    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8658    0.1588    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.3917    0.3750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8084    1.0875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9830    1.0921    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7997   -8.8149    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.9785   -8.8143    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    2.3886   -9.5258    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1871   -6.5032    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9017   -6.0870    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1840   -5.6763    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0925    2.3206    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0892    3.1377    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.3797    1.9052    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3830    1.0802    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6702    0.6649    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6735   -0.1601    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9607   -0.5755    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9640   -1.4005    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.2512   -1.8158    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2545   -2.6408    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5351   -1.4062    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5417   -3.0562    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5450   -3.8812    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8321   -4.2965    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8354   -5.1215    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.1224   -5.5364    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.3111   -5.3713    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2102   -6.3576    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4605   -6.7009    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.3842   -7.5198    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0584   -7.9910    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8075   -7.6484    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8802   -6.8303    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2010   -4.5537    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4379   -4.2402    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3279   -3.4226    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4353   -3.1090    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5453   -2.2914    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2351   -9.1589    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.9110   -0.2282    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.9155    0.5968    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.6232   -0.6446    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   11.3401   -0.2361    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   12.0521   -0.6524    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.3221    0.5887    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.0274    1.0166    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.0095    1.8414    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   12.7507    0.6198    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.0477   -1.4774    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   14.1978   -0.2514    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.9100   -0.6678    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   15.6267   -0.2591    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.3389   -0.6755    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.2022    0.5735    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.1943   -0.6368    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.1125   -1.4209    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.9375   -1.4209    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5250   -0.1500    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    7.8600   -0.6368    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5237    0.6750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2376    1.0886    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.8074    1.9114    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
 17 12  1  0
 11 18  1  0
 18 19  1  0
 16  8  1  0
  8 20  1  0
  6  5  1  0
  1  3  1  0
  2  1  1  0
  3  2  1  0
  5  4  1  0
  8  7  2  0
 10 11  2  0
  9  8  2  0
 11 13  1  0
 12  5  1  0
  5 10  1  0
 12 13  2  0
 13 14  1  0
 14 15  2  0
 15 16  1  0
 16 17  2  0
 38 39  1  0
 38 40  2  0
 39 41  1  0
 30 31  2  0
 41 42  1  0
 23 22  1  0
 42 43  1  0
 30 32  1  0
 43 44  1  0
 25 24  2  0
 44 45  1  0
 50 25  1  0
 45 46  1  0
 25 58  1  0
 32 33  1  0
 46 28  1  0
 28 48  1  0
 47 45  1  0
 26 25  2  0
 33 34  1  0
 47 48  2  0
 28 27  1  0
 48 49  1  0
 34 35  1  0
 49 50  2  0
 29 28  1  0
 50 51  1  0
 35 36  1  0
 51 52  2  0
 52 47  1  0
 21 23  1  0
 46 53  2  0
 65 67  2  0
 63 68  2  0
  3 63  1  1
  2 69  1  6
 59 60  2  0
 69 70  1  0
 70 71  1  0
 59 61  1  0
 71 72  1  0
 69 73  2  0
 61 62  1  0
 62 63  1  0
 62 64  1  0
 64 65  1  0
 65 66  1  0
 36 37  1  0
 74 59  1  6
 75 76  1  0
 53 54  1  0
 54 55  2  0
 37 38  1  0
 76 74  1  0
 74 77  1  0
 77 78  1  0
 78 75  1  0
 55 56  1  0
 77 79  1  0
 22 21  1  0
 79 80  2  0
 79 22  1  0
 56 57  2  0
 22 81  1  0
 81 30  1  0
 57 10  1  0
M  CHG  2  11   1  58  -1
M  END

Associated Targets(non-human)

Lgmn Legumain (23 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Ctsb Cathepsin B (24 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Ctsh Pro-cathepsin H (2 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
RAW264.7 (28094 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: Small moleculeTopical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Calculated Properties

Molecular Weight: 1163.38Molecular Weight (Monoisotopic): 1162.4715AlogP: #Rotatable Bonds:
Polar Surface Area: Molecular Species: HBA: HBD:
#RO5 Violations: HBA (Lipinski): HBD (Lipinski): #RO5 Violations (Lipinski):
CX Acidic pKa: CX Basic pKa: CX LogP: CX LogD:
Aromatic Rings: Heavy Atoms: QED Weighted: Np Likeness Score:

References

1. Lee J, Bogyo M..  (2012)  Synthesis and evaluation of aza-peptidyl inhibitors of the lysosomal asparaginyl endopeptidase, legumain.,  22  (3): [PMID:22243962] [10.1016/j.bmcl.2011.12.079]

Source