4-N-p-Methylbenzylcytosine

ID: ALA2063053

Chembl Id: CHEMBL2063053

PubChem CID: 53390168

Max Phase: Preclinical

Molecular Formula: C12H13N3O

Molecular Weight: 215.26

Molecule Type: Small molecule

Associated Items:

Names and Identifiers

Canonical SMILES:  Cc1ccc(CNc2cc[nH]c(=O)n2)cc1

Standard InChI:  InChI=1S/C12H13N3O/c1-9-2-4-10(5-3-9)8-14-11-6-7-13-12(16)15-11/h2-7H,8H2,1H3,(H2,13,14,15,16)

Standard InChI Key:  VTSRUHRNVPTOOI-UHFFFAOYSA-N

Alternative Forms

Associated Targets(non-human)

sssIM CpG DNA methylase (38 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: Small moleculeTopical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Calculated Properties

Molecular Weight: 215.26Molecular Weight (Monoisotopic): 215.1059AlogP: 1.69#Rotatable Bonds: 3
Polar Surface Area: 57.78Molecular Species: NEUTRALHBA: 3HBD: 2
#RO5 Violations: HBA (Lipinski): 4HBD (Lipinski): 2#RO5 Violations (Lipinski):
CX Acidic pKa: 9.98CX Basic pKa: CX LogP: 1.28CX LogD: 1.28
Aromatic Rings: 2Heavy Atoms: 16QED Weighted: 0.82Np Likeness Score: -1.17

References

1. Plitta B, Adamska E, Giel-Pietraszuk M, Fedoruk-Wyszomirska A, Naskręt-Barciszewska M, Markiewicz WT, Barciszewski J..  (2012)  New cytosine derivatives as inhibitors of DNA methylation.,  55  [PMID:22854677] [10.1016/j.ejmech.2012.07.024]

Source