3-((1H-indol-3-yl)methyl)-5-(4-(3-(methylamino)propoxy)phenyl)pyrazin-2(1H)-one

ID: ALA2417890

PubChem CID: 72163955

Max Phase: Preclinical

Molecular Formula: C23H24N4O2

Molecular Weight: 388.47

Molecule Type: Small molecule

This compound is available for customization.

Associated Items:

Names and Identifiers

Canonical SMILES:  CNCCCOc1ccc(-c2c[nH]c(=O)c(Cc3c[nH]c4ccccc34)n2)cc1

Standard InChI:  InChI=1S/C23H24N4O2/c1-24-11-4-12-29-18-9-7-16(8-10-18)22-15-26-23(28)21(27-22)13-17-14-25-20-6-3-2-5-19(17)20/h2-3,5-10,14-15,24-25H,4,11-13H2,1H3,(H,26,28)

Standard InChI Key:  RKFILFQATOMBTM-UHFFFAOYSA-N

Molfile:  

     RDKit          2D

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   27.4750  -30.1948    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   27.4750  -31.0120    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   28.1802  -31.4165    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   28.8855  -31.0120    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   28.8855  -30.1948    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   28.1802  -29.7821    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   29.5908  -29.7903    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   30.2976  -30.2027    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   31.0060  -29.7969    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   31.0088  -28.9788    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   30.2973  -28.5683    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   29.5918  -28.9765    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   26.7661  -29.7883    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   26.7637  -28.9711    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   26.7678  -31.4216    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   31.7172  -28.5714    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   32.4242  -28.9811    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   33.1326  -28.5736    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   33.8397  -28.9834    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   34.5480  -28.5759    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   35.2551  -28.9856    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   27.4196  -28.4888    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   27.1648  -27.7123    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   26.0974  -28.4927    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   26.3486  -27.7174    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   25.8033  -27.1142    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   25.0067  -27.2851    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   24.7583  -28.0646    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   25.3053  -28.6644    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  1  6  2  0
  2  3  1  0
  3  4  1  0
  4  5  2  0
  5  6  1  0
  7  8  2  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11 12  2  0
 12  7  1  0
  5  7  1  0
  1 13  1  0
 13 14  1  0
  2 15  2  0
 10 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 14 22  2  0
 22 23  1  0
 23 25  1  0
 24 14  1  0
 24 25  2  0
 25 26  1  0
 26 27  2  0
 27 28  1  0
 28 29  2  0
 29 24  1  0
M  END

Associated Targets(Human)

CAMA-1 (145 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
SK-BR-3 (5175 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: Small moleculeTopical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Biocomponents

Calculated Properties

Molecular Weight: 388.47Molecular Weight (Monoisotopic): 388.1899AlogP: 3.50#Rotatable Bonds: 8
Polar Surface Area: 82.80Molecular Species: BASEHBA: 4HBD: 3
#RO5 Violations: HBA (Lipinski): 6HBD (Lipinski): 3#RO5 Violations (Lipinski):
CX Acidic pKa: 10.89CX Basic pKa: 10.03CX LogP: 2.04CX LogD: -0.15
Aromatic Rings: 4Heavy Atoms: 29QED Weighted: 0.40Np Likeness Score: -0.48

References

1. Saha S, Reddy ChV, Xu S, Sankar S, Neamati N, Patro B..  (2013)  Synthesis and SAR studies of marine natural products ma'edamines A, B and their analogues.,  23  (18): [PMID:23927972] [10.1016/j.bmcl.2013.07.017]

Source