(4S,4aR,5S,5aR,6R,12aS)-4-(Dimethylamino)-9-(N-methoxy-N-D-erythrosylglycyl)amino-3,5,10,12,12a-pentahydroxy-6-methyl-1,11-dioxo-1,4,4a,5,5a,6,11,12a-octahydrotetracene-2-carboxamide

ID: ALA2419636

PubChem CID: 73356780

Max Phase: Preclinical

Molecular Formula: C29H36N4O13

Molecular Weight: 648.62

Molecule Type: Small molecule

This compound is available for customization.

Associated Items:

Names and Identifiers

Canonical SMILES:  CON(CC(=O)Nc1ccc2c(c1O)C(=O)C1=C(O)[C@]3(O)C(=O)C(C(N)=O)=C(O)[C@@H](N(C)C)[C@@H]3[C@@H](O)[C@@H]1[C@H]2C)C1OC[C@H](O)[C@@H]1O

Standard InChI:  InChI=1S/C29H36N4O13/c1-9-10-5-6-11(31-13(35)7-33(45-4)28-21(37)12(34)8-46-28)20(36)15(10)22(38)16-14(9)23(39)18-19(32(2)3)24(40)17(27(30)43)26(42)29(18,44)25(16)41/h5-6,9,12,14,18-19,21,23,28,34,36-37,39-41,44H,7-8H2,1-4H3,(H2,30,43)(H,31,35)/t9-,12-,14+,18+,19-,21-,23-,28?,29-/m0/s1

Standard InChI Key:  HUIGTUOWZGAVHL-SAWPYZDBSA-N

Molfile:  

     RDKit          2D

 48 52  0  0  0  0  0  0  0  0999 V2000
   11.9924  -17.1066    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   19.1242  -17.1047    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.6895  -17.0965    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.5464  -17.1172    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.4109  -17.5152    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.8249  -17.5194    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.1283  -16.2837    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.5505  -16.2920    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.9845  -17.5152    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.7018  -16.2712    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.2630  -17.0965    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.9845  -15.8566    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.2712  -16.2712    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.8374  -15.8690    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.4150  -15.8566    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.2596  -17.5318    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.8208  -18.3446    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   16.9762  -18.3404    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   19.8497  -15.0439    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   15.5498  -17.5152    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.1158  -17.9299    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   21.2513  -18.3570    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   18.4026  -18.3404    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   21.2721  -15.8815    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   21.9770  -17.1296    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   15.5498  -15.8566    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.5581  -18.3404    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   14.8365  -16.2796    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.8365  -17.1047    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.5630  -14.6416    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.1407  -14.6293    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.0260  -16.6569    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   19.1283  -15.4585    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   14.1258  -17.5157    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   16.9835  -15.0356    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.4204  -15.0356    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.4145  -17.1057    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.7038  -17.5166    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.4140  -16.2847    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.9918  -16.2856    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.2806  -15.8756    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.2817  -17.5177    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.5333  -17.1878    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.9844  -17.7984    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3954  -18.5092    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.1982  -18.3378    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.8096  -18.8859    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.0620  -19.2595    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  3  5  2  0
  4  6  1  0
  5  2  1  0
  6  2  1  0
  7  2  1  0
  8 14  1  0
  9  3  1  0
 10 15  1  0
 11  9  1  0
 12 10  1  0
 13 12  1  0
 14  7  1  0
 15  7  1  0
 16  4  1  0
 17  6  2  0
 18  9  2  0
 14 19  1  6
 20 11  1  0
  2 21  1  6
 22 16  2  0
 23  5  1  0
 24  8  1  0
 25 16  1  0
 26 13  1  0
 27 20  1  0
 28 26  2  0
 29 20  2  0
 30 19  1  0
 31 19  1  0
 10 32  1  6
  7 33  1  6
 10  3  1  0
  4  8  2  0
 13 11  2  0
 28 29  1  0
 29 34  1  0
 12 35  1  6
 15 36  1  6
 34 37  1  0
 37 38  1  0
 37 39  2  0
 38  1  1  0
  1 40  1  0
 40 41  1  0
  1 42  1  0
 42 43  1  0
 43 44  1  0
 44 45  1  0
 45 46  1  0
 46 42  1  0
 46 47  1  1
 45 48  1  1
M  END

Associated Targets(Human)

IMR-90 (216 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
A549 (127892 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Associated Targets(non-human)

Staphylococcus aureus (210822 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Escherichia coli (133304 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: Small moleculeTopical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Calculated Properties

Molecular Weight: 648.62Molecular Weight (Monoisotopic): 648.2279AlogP: -2.47#Rotatable Bonds: 7
Polar Surface Area: 272.88Molecular Species: ACIDHBA: 15HBD: 9
#RO5 Violations: 3HBA (Lipinski): 17HBD (Lipinski): 10#RO5 Violations (Lipinski): 3
CX Acidic pKa: 2.87CX Basic pKa: 7.78CX LogP: -5.71CX LogD: -6.21
Aromatic Rings: 1Heavy Atoms: 46QED Weighted: 0.08Np Likeness Score: 1.12

References

1. Zhang J, Ponomareva LV, Marchillo K, Zhou M, Andes DR, Thorson JS..  (2013)  Synthesis and antibacterial activity of doxycycline neoglycosides.,  76  (9): [PMID:23987662] [10.1021/np4003096]

Source