6-(1,1,7-Trioxo-1,2,3,4,5,6,7,8-octahydro-1lambda*6*-cyclopenta[b]thieno[2,3-e]pyridin-8-yl)-pyridine-2-carbonitrile

ID: ALA3138602

PubChem CID: 11151569

Max Phase: Preclinical

Molecular Formula: C16H13N3O3S

Molecular Weight: 327.37

Molecule Type: Small molecule

Names and Identifiers

Canonical SMILES:  N#Cc1cccc(C2C3=C(CCC3=O)NC3=C2S(=O)(=O)CC3)n1

Standard InChI:  InChI=1S/C16H13N3O3S/c17-8-9-2-1-3-10(18-9)15-14-11(4-5-13(14)20)19-12-6-7-23(21,22)16(12)15/h1-3,15,19H,4-7H2

Standard InChI Key:  SEBALDIRDDKSDU-UHFFFAOYSA-N

Molfile:  

     RDKit          2D

 23 26  0  0  0  0  0  0  0  0999 V2000
    2.6880    0.4887    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4728    0.7504    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    1.9747    0.8970    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2654    0.4901    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6961   -0.3265    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2695   -0.3459    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9869   -0.7500    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.9707    1.7206    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2575    2.1289    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.4698    0.7400    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4792   -0.5723    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9627    0.0914    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1729    3.7650    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.8835    1.3340    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2964    0.7543    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5403    3.3566    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4763   -0.6076    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2535    2.9525    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0178    0.0638    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2123    1.5207    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.6800    2.1358    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6760    2.9594    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9627    3.3760    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  0
  3  1  1  0
  4  3  1  0
  5  1  2  0
  6  7  1  0
  7  5  1  0
  8  3  1  0
  9  8  2  0
 10  4  1  0
 11  5  1  0
 12  2  1  0
 13 16  3  0
 14  2  2  0
 15  2  2  0
 16 18  1  0
 17  6  1  0
 18  9  1  0
 19 10  1  0
 20 10  2  0
 21  8  1  0
 22 21  2  0
 23 22  1  0
 12 11  1  0
  4  6  2  0
 17 19  1  0
 18 23  2  0
M  END

Alternative Forms

1. Parent:

   

   ALA3138602

   6-(6,6,10-Trioxo-6lambda6-thia-2-azatricyclo[7.3.0.03,7]dodeca-1(9),3(7)-dien-8-yl)pyridine-2-carbonitrile

Molecule Features

Natural Product: No

Oral: No

Chemical Probe: No

Parenteral: No

Molecule Type: Small molecule

Topical: No

First In Class: No

Black Box: No

Chirality: No

Availability: No

Prodrug: No

Calculated Properties

Molecular Weight: 327.37

Molecular Weight (Monoisotopic): 327.0678

AlogP: 1.29

#Rotatable Bonds: 1

Polar Surface Area: 99.92

Molecular Species: NEUTRAL

HBA: 6

HBD: 1

#RO5 Violations: ┄

HBA (Lipinski): 6

HBD (Lipinski): 1

#RO5 Violations (Lipinski): ┄

CX Acidic pKa: ┄

CX Basic pKa: ┄

CX LogP: -0.81

CX LogD: -0.81

Aromatic Rings: 1

Heavy Atoms: 23

QED Weighted: 0.83

Np Likeness Score: -0.92

References

1. Carroll WA, Altenbach RJ, Bai H, Brioni JD, Brune ME, Buckner SA, Cassidy C, Chen Y, Coghlan MJ, Daza AV, Drizin I, Fey TA, Fitzgerald M, Gopalakrishnan M, Gregg RJ, Henry RF, Holladay MW, King LL, Kort ME, Kym PR, Milicic I, Tang R, Turner SC, Whiteaker KL, Yi L, Zhang H, Sullivan JP..  (2004)  Synthesis and structure-activity relationships of a novel series of 2,3,5,6,7,9-hexahydrothieno[3,2-b]quinolin-8(4H)-one 1,1-dioxide K(ATP) channel openers: discovery of (-)-(9S)-9-(3-bromo-4-fluorophenyl)-2,3,5,6,7,9- hexahydrothieno[3,2-b]quinolin-8(4H)-one 1,1-dioxide (A-278637), a potent K(ATP) opener that selectively inhibits spontaneous bladder contractions.,  47  (12): [PMID:15163196] [10.1021/jm030356w]

Source

Source(1):

• Scientific Literature