2-(2-{[1-(4-Carboxy-2-{2-[(9,10-dioxo-9,10-dihydro-phenanthrene-2-carbonyl)-amino]-5-guanidino-pentanoylamino}-butyryl)-pyrrolidine-2-carbonyl]-amino}-5-guanidino-pentanoylamino)-pentanedioic acid

ID: ALA3144419

PubChem CID: 10843466

Max Phase: Preclinical

Molecular Formula: C42H53N11O13

Molecular Weight: 919.95

Molecule Type: Small molecule

This compound is available for customization.

Associated Items:

Names and Identifiers

Canonical SMILES:  N=C(N)NCCC[C@H](NC(=O)c1ccc2c(c1)C(=O)C(=O)c1ccccc1-2)C(=O)N[C@@H](CCC(=O)O)C(=O)N1CCC[C@H]1C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CCC(=O)O)C(=O)O

Standard InChI:  InChI=1S/C42H53N11O13/c43-41(44)47-17-3-8-26(49-35(60)21-11-12-23-22-6-1-2-7-24(22)33(58)34(59)25(23)20-21)36(61)51-28(13-15-31(54)55)39(64)53-19-5-10-30(53)38(63)50-27(9-4-18-48-42(45)46)37(62)52-29(40(65)66)14-16-32(56)57/h1-2,6-7,11-12,20,26-30H,3-5,8-10,13-19H2,(H,49,60)(H,50,63)(H,51,61)(H,52,62)(H,54,55)(H,56,57)(H,65,66)(H4,43,44,47)(H4,45,46,48)/t26-,27-,28-,29-,30-/m0/s1

Standard InChI Key:  PEFCDHBHHURBTL-IIZANFQQSA-N

Molfile:  

     RDKit          2D

 66 69  0  0  0  0  0  0  0  0999 V2000
    5.0546   -3.2590    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9031   -0.5414    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2464    0.2088    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0677    0.2866    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5765   -3.9313    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3812   -1.2138    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3713   -3.9130    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5457   -0.3857    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2025   -1.1359    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8796   -3.2505    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0828   -1.4473    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5906   -3.0255    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5021   -4.3861    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0818   -0.6192    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4120   -3.1033    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    7.1908   -3.8183    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.4261   -2.1974    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    8.9939   -5.0486    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.7552   -3.8535    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2615   -1.3694    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0600   -6.9412    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3242   -0.4138    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.1412   -4.1969    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0379   -1.9640    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.8134   -4.9539    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6826   -4.4808    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2474   -2.2753    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5517   -7.6037    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.1455   -0.4917    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.9778   -5.1204    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.6164   -6.1842    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7683    0.8812    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4109    1.0368    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.9198   -4.6815    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.0435   -4.6700    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.5609   -0.7749    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.1126   -3.6978    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.8300   -3.6291    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2166   -2.0418    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.9608   -4.1022    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2772   -4.5259    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.3210   -5.8706    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.4360   -6.0895    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.3051   -5.6164    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.8461   -1.0862    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.3878   -6.1842    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.9809    0.3364    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.2404   -7.0359    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.7916   -2.4770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.4558   -4.4480    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.1247   -5.5217    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.6495   -3.5344    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.2886   -6.9412    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1565   -5.0426    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3671   -0.3079    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.6805   -1.8083    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1264   -2.4633    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4541   -1.9853    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7254   -1.6029    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3548   -5.2378    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0248   -1.0084    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2074   -6.0895    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5352   -5.3325    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5468   -1.6807    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5019   -1.7305    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8451   -0.9803    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  2 14  1  0
  3  2  1  0
  4  3  1  0
  5  1  1  0
  6 24  1  0
 10  7  1  1
  8  9  2  0
  9  6  1  0
 10  1  1  0
 11 17  1  0
 12 15  1  0
 13 26  1  0
 14 20  2  0
 15 19  1  0
 16  7  1  0
 17 27  1  0
 18 13  1  0
 19  5  1  0
 20 11  1  0
 21 46  1  0
 22 45  1  0
 23 25  1  0
 24 39  2  0
 25 18  1  0
 26 16  1  0
 27 12  1  0
 28 21  2  0
 29 22  2  0
 30 50  1  0
 31 51  1  0
 32  3  2  0
 33  4  2  0
 34  5  2  0
 35  7  2  0
 36 11  2  0
 37 12  2  0
 38 13  2  0
 39 20  1  0
 40 23  2  0
 19 41  1  6
 42 30  2  0
 43 31  2  0
 25 44  1  6
 45 61  1  0
 46 62  1  0
 47 22  1  0
 48 21  1  0
 49  1  1  0
 50 41  1  0
 51 44  1  0
 52 23  1  0
 53 31  1  0
 54 30  1  0
 55  8  1  0
 56  9  1  0
 57 10  1  0
 58 49  1  0
 27 59  1  1
 26 60  1  6
 61 64  1  0
 62 63  1  0
 63 60  1  0
 64 59  1  0
 65 56  2  0
 66 65  1  0
 58 57  1  0
  6  2  2  0
  4  8  1  0
 66 55  2  0
M  END

Associated Targets(Human)

PTPRC Tchem Leukocyte common antigen (2317 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: Small moleculeTopical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Calculated Properties

Molecular Weight: 919.95Molecular Weight (Monoisotopic): 919.3824AlogP: -1.38#Rotatable Bonds: 24
Polar Surface Area: 406.55Molecular Species: ZWITTERIONHBA: 12HBD: 13
#RO5 Violations: 3HBA (Lipinski): 24HBD (Lipinski): 15#RO5 Violations (Lipinski): 3
CX Acidic pKa: 3.32CX Basic pKa: 11.83CX LogP: -6.00CX LogD: -8.81
Aromatic Rings: 2Heavy Atoms: 66QED Weighted: 0.02Np Likeness Score: -0.02

References

1. Urbanek RA, Suchard SJ, Steelman GB, Knappenberger KS, Sygowski LA, Veale CA, Chapdelaine MJ..  (2001)  Potent reversible inhibitors of the protein tyrosine phosphatase CD45.,  44  (11): [PMID:11356112] [10.1021/jm000447i]

Source