5-hydroseleno-2'-deoxyuridylate

ID: ALA3228320

PubChem CID: 90654220

Max Phase: Preclinical

Molecular Formula: C9H13N2O8PSe

Molecular Weight: 387.14

Molecule Type: Small molecule

This compound is available for customization.

Associated Items:

Names and Identifiers

Canonical SMILES:  O=c1[nH]c(=O)n([C@H]2C[C@H](O)[C@@H](COP(=O)(O)O)O2)cc1[SeH]

Standard InChI:  InChI=1S/C9H13N2O8PSe/c12-4-1-7(19-5(4)3-18-20(15,16)17)11-2-6(21)8(13)10-9(11)14/h2,4-5,7,12,21H,1,3H2,(H,10,13,14)(H2,15,16,17)/t4-,5+,7+/m0/s1

Standard InChI Key:  TYHWKDVROCEJKI-HBPOCXIASA-N

Molfile:  

     RDKit          2D

 21 22  0  0  0  0  0  0  0  0999 V2000
    4.0413   -8.1639    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
    4.5150   -7.4890    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.1688   -6.7429    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6426   -6.0721    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4639   -6.0592    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9585   -6.7148    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7021   -5.2740    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0313   -4.8002    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3798   -5.2948    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.0184   -3.9789    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.7251   -3.5592    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4405   -3.9566    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7121   -2.7380    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.9926   -2.3365    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9796   -1.5153    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.2900   -2.7604    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3029   -3.5816    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5746   -2.3589    0.0000 Se  0  0  0  0  0  2  0  0  0  0  0  0
    3.2231   -8.0886    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.3908   -8.9045    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.4545   -8.7415    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  4  3  1  1
  4  5  1  0
  5  6  1  6
  5  7  1  0
  7  8  1  0
  8  9  1  0
  4  9  1  0
  8 10  1  1
 10 11  1  0
 11 12  2  0
 11 13  1  0
 13 14  1  0
 14 15  2  0
 14 16  1  0
 16 17  2  0
 10 17  1  0
 16 18  1  0
  1 19  2  0
  1 20  1  0
  1 21  1  0
M  END

Alternative Forms

  1. Parent:

    ALA3228320

    CID 90654220

Associated Targets(non-human)

thyA Thymidylate synthase (501 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: Small moleculeTopical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Calculated Properties

Molecular Weight: 387.14Molecular Weight (Monoisotopic): 387.9575AlogP: #Rotatable Bonds:
Polar Surface Area: Molecular Species: HBA: HBD:
#RO5 Violations: HBA (Lipinski): HBD (Lipinski): #RO5 Violations (Lipinski):
CX Acidic pKa: CX Basic pKa: CX LogP: CX LogD:
Aromatic Rings: Heavy Atoms: QED Weighted: Np Likeness Score:

References

1. Choi S, Kalman TI, Bardos TJ..  (1979)  Synthesis of 5-selenium-substituted uracil derivatives. Inhibition of thymidylate synthetase by 5-hydroseleno-2'-deoxyuridylate.,  22  (6): [PMID:110931] [10.1021/jm00192a004]

Source