(6R,9R,12R,16S)-6,12-diisopropyl-9-methyl-16-[4-(octyldisulfanyl)but-1-enyl]-1-oxa-4,7,10,13-tetrazacyclohexadecane-2,5,8,11,14-pentone

ID: ALA3628320

PubChem CID: 122193365

Max Phase: Preclinical

Molecular Formula: C30H52N4O6S2

Molecular Weight: 628.90

Molecule Type: Small molecule

Names and Identifiers

Canonical SMILES:  CCCCCCCCSSCC/C=C/[C@@H]1CC(=O)N[C@H](C(C)C)C(=O)N[C@H](C)C(=O)N[C@H](C(C)C)C(=O)NCC(=O)O1

Standard InChI:  InChI=1S/C30H52N4O6S2/c1-7-8-9-10-11-13-16-41-42-17-14-12-15-23-18-24(35)33-27(21(4)5)30(39)32-22(6)28(37)34-26(20(2)3)29(38)31-19-25(36)40-23/h12,15,20-23,26-27H,7-11,13-14,16-19H2,1-6H3,(H,31,38)(H,32,39)(H,33,35)(H,34,37)/b15-12+/t22-,23-,26-,27-/m1/s1

Standard InChI Key:  OCGWCWUUXSMEJO-DDZCXSQBSA-N

Molfile:  

     RDKit          2D

 42 42  0  0  0  0  0  0  0  0999 V2000
    2.7184    2.7184    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    3.8444    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4712    3.5517    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.9304    4.6604    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4712    3.5517    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0029    5.3542    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0430    5.9528    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0353    5.9559    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7184    2.7184    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5669    3.5669    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5517    1.4712    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.8444    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5517   -1.4712    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.0444    0.0000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.7184   -2.7184    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7881   -3.7839    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4712   -3.5517    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9468   -3.4717    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.4794   -4.9435    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000   -3.8444    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    1.9304   -4.6604    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.4712   -3.5517    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7184   -2.7184    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5517   -1.4712    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5669   -3.5669    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5517    1.4712    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.8444    0.0000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3542    0.0030    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1028    1.3037    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6037    1.3067    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -8.3523    2.6074    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -9.8531    2.6104    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
  -10.6018    3.9112    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    4.6604    1.9304    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.1026    3.9141    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -12.8513    5.2149    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -14.3521    5.2179    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -15.1008    6.5186    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -16.6016    6.5216    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -17.3503    7.8224    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -18.8511    7.8253    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  -19.4497    8.8654    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  2  3  1  0
  4  5  2  0
  5  2  1  0
  5  1  1  0
  2  6  1  6
  6  7  1  0
  6  8  1  0
  3  9  1  0
  9 10  2  0
  1 11  1  0
 11 12  1  0
 12 13  1  0
 12 14  2  0
 13 15  1  0
 15 16  1  6
 15 17  1  0
 16 18  1  0
 16 19  1  0
 17 20  1  0
 17 21  2  0
 20 22  1  0
 22 23  1  0
 23 24  1  0
 23 25  2  0
  9 26  1  0
 26 27  1  0
 27 24  1  0
 27 28  1  6
 28 29  2  0
 29 30  1  0
 30 31  1  0
 31 32  1  0
 32 33  1  0
 11 34  1  6
 33 35  1  0
 35 36  1  0
 36 37  1  0
 37 38  1  0
 38 39  1  0
 39 40  1  0
 40 41  1  0
 41 42  1  0
M  END

Alternative Forms

1. Parent:

   

   ALA3628320

   ---

Molecule Features

Natural Product: No

Oral: No

Chemical Probe: No

Parenteral: No

Molecule Type: Small molecule

Topical: No

First In Class: No

Black Box: No

Chirality: No

Availability: No

Prodrug: No

Calculated Properties

Molecular Weight: 628.90

Molecular Weight (Monoisotopic): 628.3328

AlogP: 3.89

#Rotatable Bonds: 14

Polar Surface Area: 142.70

Molecular Species: NEUTRAL

HBA: 8

HBD: 4

#RO5 Violations: 1

HBA (Lipinski): 10

HBD (Lipinski): 4

#RO5 Violations (Lipinski): 1

CX Acidic pKa: 10.57

CX Basic pKa: ┄

CX LogP: 4.03

CX LogD: 4.03

Aromatic Rings: ┄

Heavy Atoms: 42

QED Weighted: 0.10

Np Likeness Score: 1.65

References

1. Ni M, Esposito E, Raj VP, Muzi L, Zunino F, Zuco V, Cominetti D, Penco S, Dal Pozzo A..  (2015)  New macrocyclic analogs of the natural histone deacetylase inhibitor FK228; design, synthesis and preliminary biological evaluation.,  23  (21): [PMID:26481659] [10.1016/j.bmc.2015.10.004]

Source

Source(1):

• Scientific Literature