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N-(cyclohexylmethyl)-3-(5-(4-(piperidin-1-yl)piperidin-1-yl)-1H-benzo[d]imidazol-2-yl)-1H-indazol-5-amine ID: ALA379108
PubChem CID: 135819983
Max Phase: Preclinical
Molecular Formula: C31H41N7
Molecular Weight: 511.72
Molecule Type: Small molecule
Associated Items:
Names and Identifiers Canonical SMILES: c1cc2[nH]nc(-c3nc4cc(N5CCC(N6CCCCC6)CC5)ccc4[nH]3)c2cc1NCC1CCCCC1
Standard InChI: InChI=1S/C31H41N7/c1-3-7-22(8-4-1)21-32-23-9-11-27-26(19-23)30(36-35-27)31-33-28-12-10-25(20-29(28)34-31)38-17-13-24(14-18-38)37-15-5-2-6-16-37/h9-12,19-20,22,24,32H,1-8,13-18,21H2,(H,33,34)(H,35,36)
Standard InChI Key: HMKZBWZSRGIVPM-UHFFFAOYSA-N
Molfile:
RDKit 2D
38 44 0 0 0 0 0 0 0 0999 V2000
11.0371 -29.8902 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
11.0302 -30.7173 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
11.7399 -31.1349 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
11.7494 -29.4825 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
12.4644 -29.8960 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
12.4593 -30.7226 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
13.2439 -30.9830 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
13.7339 -30.3172 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
13.2522 -29.6455 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
13.5120 -28.8629 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
14.2979 -28.6175 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
13.0316 -28.1973 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
13.5203 -27.5331 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
14.3028 -27.7970 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
14.9205 -27.2517 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
14.7568 -26.4425 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
13.9700 -26.1814 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
13.3557 -26.7285 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
13.8033 -25.3738 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
14.4265 -24.8258 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
14.2625 -24.0213 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
13.4807 -23.7577 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
12.8626 -24.3051 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
13.0263 -25.1160 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
13.3170 -22.9495 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
13.9375 -22.4092 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
13.7765 -21.6040 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
12.9957 -21.3374 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
12.3756 -21.8825 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
12.5361 -22.6940 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
10.3255 -29.4734 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
10.3306 -28.6488 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
9.6188 -28.2322 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
9.6283 -27.4083 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
8.9207 -26.9918 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
8.2018 -27.3962 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
8.1947 -28.2218 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
8.9068 -28.6430 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
17 18 1 0
18 13 2 0
8 9 2 0
17 19 1 0
19 20 1 0
9 5 1 0
4 1 2 0
9 10 1 0
10 11 1 0
5 6 2 0
19 24 1 0
20 21 1 0
21 22 1 0
22 23 1 0
23 24 1 0
22 25 1 0
25 26 1 0
11 14 1 0
13 12 1 0
12 10 2 0
2 3 2 0
3 6 1 0
25 30 1 0
26 27 1 0
27 28 1 0
28 29 1 0
29 30 1 0
13 14 1 0
1 31 1 0
1 2 1 0
31 32 1 0
14 15 2 0
32 33 1 0
33 34 1 0
5 4 1 0
15 16 1 0
6 7 1 0
16 17 2 0
7 8 1 0
33 38 1 0
34 35 1 0
35 36 1 0
36 37 1 0
37 38 1 0
M END Associated Targets(Human) Associated Targets(non-human) Molecule Features Natural Product: NoOral: NoChemical Probe: NoParenteral: NoMolecule Type: Small moleculeTopical: NoFirst In Class: NoBlack Box: NoChirality: NoAvailability: NoProdrug: No
Drug Indications MESH ID MESH Heading EFO IDs EFO Terms Max Phase for Indication References
Mechanisms of Action Mechanism of Action Action Type target ID Target Name Target Type Target Organism Binding Site Name References
Calculated Properties Molecular Weight: 511.72Molecular Weight (Monoisotopic): 511.3423AlogP: 6.55#Rotatable Bonds: 6Polar Surface Area: 75.87Molecular Species: BASEHBA: 5HBD: 3#RO5 Violations: 2HBA (Lipinski): 7HBD (Lipinski): 3#RO5 Violations (Lipinski): 2CX Acidic pKa: 11.15CX Basic pKa: 9.80CX LogP: 5.32CX LogD: 3.18Aromatic Rings: 4Heavy Atoms: 38QED Weighted: 0.27Np Likeness Score: -1.21
References 1. McBride CM, Renhowe PA, Heise C, Jansen JM, Lapointe G, Ma S, Piñeda R, Vora J, Wiesmann M, Shafer CM.. (2006) Design and structure-activity relationship of 3-benzimidazol-2-yl-1H-indazoles as inhibitors of receptor tyrosine kinases., 16 (13): [PMID:16603352 ] [10.1016/j.bmcl.2006.03.069 ]