Neo-Neo dimer

ID: ALA384228

PubChem CID: 44269413

Max Phase: Preclinical

Molecular Formula: C54H105N11O27S4

Molecular Weight: 1468.75

Molecule Type: Small molecule

Associated Items:

This compound is not in our inventory system

Names and Identifiers

Canonical SMILES:  NCC1OC(OC2C(CSCCOCCSSCCOCCSCC3OC(OC4C(O)C(O)CC(N)C4OC4OC(CN)C(O)C(O)C4N)C(O)C3OC3OC(CN)C(O)C(O)C3N)OC(OC3C(O)C(N)CC(N)C3OC3OC(CN)C(O)C(O)C3N)C2O)C(N)C(O)C1O

Standard InChI:  InChI=1S/C54H105N11O27S4/c55-11-21-33(69)37(73)27(62)49(81-21)87-43-18(60)9-17(59)31(67)47(43)91-53-41(77)45(89-51-29(64)39(75)35(71)23(13-57)83-51)25(85-53)15-93-5-1-79-3-7-95-96-8-4-80-2-6-94-16-26-46(90-52-30(65)40(76)36(72)24(14-58)84-52)42(78)54(86-26)92-48-32(68)20(66)10-19(61)44(48)88-50-28(63)38(74)34(70)22(12-56)82-50/h17-54,66-78H,1-16,55-65H2

Standard InChI Key:  KWHGXVUTJIEFKA-UHFFFAOYSA-N

Molfile:  

     RDKit          2D

 96103  0  0  0  0  0  0  0  0999 V2000
   -2.2708   -1.3542    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.2875   -1.1500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9583   -1.7042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.9625   -1.5042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.7250    0.4583    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.1917   -3.7042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7083    0.2583    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8125   -3.9042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.6542   -2.2917    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.3542   -2.5000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.9042   -0.2125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9083   -0.4167    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2667   -4.8042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.0167    0.7333    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.7500   -4.6042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0000    0.5333    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.6542   -2.2917    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6375   -2.5000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0500    0.1250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.4542   -4.3167    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5625   -4.5250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.9667    0.3250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5083   -1.1542    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.5250   -0.9625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.1542   -1.0292    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1458   -1.2292    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.2667    1.3500    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1833   -4.3167    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2500    1.1583    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.1917   -4.1167    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.2042   -2.9292    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.8042   -3.1292    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1083   -0.4167    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.1167   -0.2125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   14.3042   -0.8167    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3000   -1.0167    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4833   -4.9292    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5042    1.0125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.5125    1.2208    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.5000   -4.7292    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3500   -1.5042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6667   -1.7042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.2792    0.9333    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9375   -4.0417    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.9542   -3.8292    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7417    0.7333    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5833   -0.7542    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.5917   -0.5542    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.0500   -1.1542    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0333   -1.3542    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.6667   -0.2375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6583   -0.4375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0542   -4.8042    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    8.9625   -4.6042    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.0042   -0.2375    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   11.0042   -0.0292    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   12.0917   -2.9292    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0875   -3.1292    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.4542   -5.0917    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.5625   -5.2917    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.9417    0.3208    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.0792    0.1125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.3875    0.1958    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.5875    0.0708    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   15.8375   -1.1542    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4958   -1.7625    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   14.5042   -1.5542    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.7250    1.2208    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2708   -4.9292    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.2875   -4.7292    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    2.2917    1.0125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.8875   -3.5542    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    5.1292   -3.7625    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
   -4.6083   -1.9542    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.4125   -1.4625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.6000   -1.2667    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.7167   -3.6375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6958   -3.8292    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.2667    1.7083    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7417    1.5083    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.0042   -1.7667    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    1.9917   -1.9750    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    6.4792   -3.0500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5292   -3.2500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0542    1.8958    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3833   -4.2167    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   10.9542    2.1000    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   13.4000   -4.0167    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.0875   -1.9875    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.9167   -1.7792    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.6875   -2.4917    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3292   -2.2917    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7500   -1.7167    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2542   -1.5167    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3417   -2.2292    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6667   -2.0292    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  2 24  1  0
  3 23  1  0
  4 25  1  0
  5 34  1  0
  6 31  1  0
  7 33  1  0
  8 32  1  0
  9 41  1  0
 10 18  1  0
 11  2  1  0
 12  1  1  0
 13  8  1  0
 14  5  1  0
 15  6  1  0
 16  7  1  0
 17  9  1  0
 18  3  1  0
 19 16  1  0
 20 15  1  0
 21 13  1  0
 22 14  1  0
 23  1  1  0
 24  4  1  0
 25 41  1  0
 26  3  1  0
 27  5  1  0
 28  8  1  0
 29  7  1  0
 30  6  1  0
 31  9  1  0
 32 10  1  0
 33 12  1  0
 34 11  1  0
 35  2  1  0
 36  1  1  0
 37 44  1  0
 38 46  1  0
 39 43  1  0
 40 45  1  0
 41 76  1  0
 42 26  1  0
 43 27  1  0
 44 28  1  0
 45 30  1  0
 46 29  1  0
 47 12  1  0
 48 11  1  0
 49 35  1  0
 50 36  1  0
 51 49  1  0
 52 50  1  0
 53 13  1  0
 54 15  1  0
 55 16  1  0
 56 14  1  0
 57 17  1  0
 58 18  1  0
 59 20  1  0
 60 21  1  0
 61 22  1  0
 62 19  1  0
 63 48  1  0
 64 47  1  0
 65 49  1  0
 66 36  1  0
 67 35  1  0
 68 39  1  0
 69 37  1  0
 70 40  1  0
 71 38  1  0
 72 73  1  0
 73 84  1  0
 74 50  1  0
 75 42  1  0
 76 81  1  0
 77 45  1  0
 78 44  1  0
 79 43  1  0
 80 46  1  0
 81 94  1  0
 82 75  1  0
 83 72  1  0
 84 91  1  0
 85 80  1  0
 86 78  1  0
 87 79  1  0
 88 77  1  0
 89 95  1  0
 90 92  1  0
 91 89  1  0
 92 83  1  0
 93 82  1  0
 94 96  1  0
 95 93  1  0
 96 90  1  0
 52 47  1  0
 10 42  1  0
 38 19  1  0
 37 21  1  0
  4 17  1  0
 40 20  1  0
 51 48  1  0
 39 22  1  0
M  END

Alternative Forms

  1. Parent:

    ALA384228

    Neo-Neo dimer

Associated Targets(non-human)

rev Human immunodeficiency virus type 1 REV (13 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: Small moleculeTopical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Calculated Properties

Molecular Weight: 1468.75Molecular Weight (Monoisotopic): 1467.6064AlogP: #Rotatable Bonds:
Polar Surface Area: Molecular Species: HBA: HBD:
#RO5 Violations: HBA (Lipinski): HBD (Lipinski): #RO5 Violations (Lipinski):
CX Acidic pKa: CX Basic pKa: CX LogP: CX LogD:
Aromatic Rings: Heavy Atoms: QED Weighted: Np Likeness Score:

References

1. Tok JB, Dunn LJ, Des Jean RC..  (2001)  Binding of dimeric aminoglycosides to the HIV-1 rev responsive element (RRE) RNA construct.,  11  (9): [PMID:11354359] [10.1016/s0960-894x(01)00149-4]

Source