N-(3-cyano-4,5,6,7-tetrahydrobenzo[b]thiophen-2-yl)-2-phenylacetamide

ID: ALA397167

Cas Number: 301307-93-7

PubChem CID: 684674

Max Phase: Preclinical

Molecular Formula: C17H16N2OS

Molecular Weight: 296.39

Molecule Type: Small molecule

This compound is available for customization.

Associated Items:

Names and Identifiers

Canonical SMILES:  N#Cc1c(NC(=O)Cc2ccccc2)sc2c1CCCC2

Standard InChI:  InChI=1S/C17H16N2OS/c18-11-14-13-8-4-5-9-15(13)21-17(14)19-16(20)10-12-6-2-1-3-7-12/h1-3,6-7H,4-5,8-10H2,(H,19,20)

Standard InChI Key:  XAECXGNGYGUEJS-UHFFFAOYSA-N

Molfile:  

     RDKit          2D

 21 23  0  0  0  0  0  0  0  0999 V2000
   -5.9063  -10.2548    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9063  -11.0842    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1921  -11.4966    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1921   -9.8378    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6867  -11.3333    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2029  -10.6650    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.6891   -9.9985    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4732  -10.2548    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4718  -11.0798    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3781  -10.6635    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4334   -9.2104    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1800   -8.4256    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.9644  -11.3771    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3755  -12.0921    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1396  -11.3756    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7259  -12.0890    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1414  -12.8013    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7285  -13.5144    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0972  -13.5134    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.5082  -12.7933    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.0928  -12.0832    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  6 10  1  0
  8  9  2  0
 11 12  3  0
  7 11  1  0
  1  2  1  0
 10 13  1  0
  6  7  2  0
 13 14  2  0
  1  4  1  0
 13 15  1  0
  2  3  1  0
 15 16  1  0
  3  9  1  0
 16 17  2  0
  5  6  1  0
 17 18  1  0
  7  8  1  0
 18 19  2  0
  9  5  1  0
 19 20  1  0
  8  4  1  0
 20 21  2  0
 21 16  1  0
M  END

Associated Targets(Human)

MAPK8 Tchem c-Jun N-terminal kinase 1 (5038 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
MAPK10 Tchem c-Jun N-terminal kinase 3 (3396 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
MAPK14 Tchem MAP kinase p38 alpha (12866 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
NCI-H727 (447 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
NCI-H1299 (3248 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Calu-6 (398 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Associated Targets(non-human)

Vipr1 Vasoactive intestinal polypeptide receptor 1 (86 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: Small moleculeTopical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Biocomponents

Calculated Properties

Molecular Weight: 296.39Molecular Weight (Monoisotopic): 296.0983AlogP: 3.68#Rotatable Bonds: 3
Polar Surface Area: 52.89Molecular Species: NEUTRALHBA: 3HBD: 1
#RO5 Violations: HBA (Lipinski): 3HBD (Lipinski): 1#RO5 Violations (Lipinski):
CX Acidic pKa: 10.42CX Basic pKa: CX LogP: 4.43CX LogD: 4.43
Aromatic Rings: 2Heavy Atoms: 21QED Weighted: 0.94Np Likeness Score: -2.28

References

1. Angell RM, Atkinson FL, Brown MJ, Chuang TT, Christopher JA, Cichy-Knight M, Dunn AK, Hightower KE, Malkakorpi S, Musgrave JR, Neu M, Rowland P, Shea RL, Smith JL, Somers DO, Thomas SA, Thompson G, Wang R..  (2007)  N-(3-Cyano-4,5,6,7-tetrahydro-1-benzothien-2-yl)amides as potent, selective, inhibitors of JNK2 and JNK3.,  17  (5): [PMID:17194588] [10.1016/j.bmcl.2006.12.003]
2. Nankervis JL, Feil SC, Hancock NC, Zheng Z, Ng HL, Morton CJ, Holien JK, Ho PW, Frazzetto MM, Jennings IG, Manallack DT, Martin TJ, Thompson PE, Parker MW..  (2011)  Thiophene inhibitors of PDE4: crystal structures show a second binding mode at the catalytic domain of PDE4D2.,  21  (23): [PMID:22030030] [10.1016/j.bmcl.2011.09.109]
3. Harikrishnan LS, Srivastava N, Kayser LE, Nirschl DS, Kumaragurubaran K, Roy A, Gupta A, Karmakar S, Karatt T, Mathur A, Burford NT, Chen J, Kong Y, Cvijic M, Cooper CB, Poss MA, Trainor GL, Wong TW..  (2012)  Identification and optimization of small molecule antagonists of vasoactive intestinal peptide receptor-1 (VIPR1).,  22  (6): [PMID:22365758] [10.1016/j.bmcl.2012.01.082]
4. Bennett, B L BL and 12 more authors.  2001-11-20  SP600125, an anthrapyrazolone inhibitor of Jun N-terminal kinase.  [PMID:11717429]
5. Szczepankiewicz, Bruce G BG and 25 more authors.  2006-06-15  Aminopyridine-based c-Jun N-terminal kinase inhibitors with cellular activity and minimal cross-kinase activity.  [PMID:16759099]
6. Zhao, Hongyu H and 19 more authors.  2006-07-27  Discovery of potent, highly selective, and orally bioavailable pyridine carboxamide c-Jun NH2-terminal kinase inhibitors.  [PMID:16854050]
7. Zarrinkar, Patrick P PP and 15 more authors.  2009-10-01  AC220 is a uniquely potent and selective inhibitor of FLT3 for the treatment of acute myeloid leukemia (AML).  [PMID:19654408]
8. Kamenecka, Ted and 13 more authors.  2010-01-14  Synthesis, biological evaluation, X-ray structure, and pharmacokinetics of aminopyrimidine c-jun-N-terminal kinase (JNK) inhibitors.  [PMID:19947601]
9. Goldstein, David M and 37 more authors.  2011-04-14  Discovery of 6-(2,4-difluorophenoxy)-2-[3-hydroxy-1-(2-hydroxyethyl)propylamino]-8-methyl-8H-pyrido[2,3-d]pyrimidin-7-one (pamapimod) and 6-(2,4-difluorophenoxy)-8-methyl-2-(tetrahydro-2H-pyran-4-ylamino)pyrido[2,3-d]pyrimidin-7(8H)-one (R1487) as orally bioavailable and highly selective inhibitors of p38α mitogen-activated protein kinase.  [PMID:21375264]
10. Stebbins, John L and 9 more authors.  2011-09-22  Design and characterization of a potent and selective dual ATP- and substrate-competitive subnanomolar bidentate c-Jun N-terminal kinase (JNK) inhibitor.  [PMID:21815634]
11. Zhang, Tinghu and 17 more authors.  2012-01-27  Discovery of potent and selective covalent inhibitors of JNK.  [PMID:22284361]
12. Gong, Leyi L and 19 more authors.  2012-12-15  Discovery of a novel series of 4-quinolone JNK inhibitors.  [PMID:23142618]
13. Kusakabe, Ken-ichi K and 26 more authors.  2013-06-13  Indazole-based potent and cell-active Mps1 kinase inhibitors: rational design from pan-kinase inhibitor anthrapyrazolone (SP600125).  [PMID:23634759]
14. Li, Bei B and 14 more authors.  2013-09-15  Hit-to-lead optimization and kinase selectivity of imidazo[1,2-a]quinoxalin-4-amine derived JNK1 inhibitors.  [PMID:23916259]
15. He, Yuanjun and 9 more authors.  2014-01-01  Synthesis and SAR of novel isoxazoles as potent c-jun N-terminal kinase (JNK) inhibitors.  [PMID:24332487]
16. Patel, Snahel S and 26 more authors.  2015-01-08  Discovery of dual leucine zipper kinase (DLK, MAP3K12) inhibitors with activity in neurodegeneration models.  [PMID:25341110]
17. Koch, Pierre P, Gehringer, Matthias M and Laufer, Stefan A SA.  2015-01-08  Inhibitors of c-Jun N-terminal kinases: an update.  [PMID:25415535]
18. Patel, Snahel S and 19 more authors.  2015-10-22  Scaffold-Hopping and Structure-Based Discovery of Potent, Selective, And Brain Penetrant N-(1H-Pyrazol-3-yl)pyridin-2-amine Inhibitors of Dual Leucine Zipper Kinase (DLK, MAP3K12).  [PMID:26431428]
19. Simon-Szabó, Laura L and 14 more authors.  2016-01-15  Novel compounds reducing IRS-1 serine phosphorylation for treatment of diabetes.  [PMID:26704265]
20. Klaeger, Susan S and 47 more authors.  2017-12-01  The target landscape of clinical kinase drugs.  [PMID:29191878]
21. Schepetkin, Igor A and 11 more authors.  2019-01-01  Synthesis, biological evaluation, and molecular modeling of 11H-indeno[1,2-b]quinoxalin-11-one derivatives and tryptanthrin-6-oxime as c-Jun N-terminal kinase inhibitors.  [PMID:30347329]
22. Riggs, Jennifer R JR and 18 more authors.  2019-05-09  Design and Optimization Leading to an Orally Active TTK Protein Kinase Inhibitor with Robust Single Agent Efficacy.  [PMID:30998356]
23. Hatcher, John M and 8 more authors.  2020-11-12  Discovery of a Selective, Covalent IRAK1 Inhibitor with Antiproliferative Activity in MYD88 Mutated B-Cell Lymphoma.  [PMID:33214835]

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