MANZAMINE A

ID: ALA403233

Max Phase: Preclinical

Molecular Formula: C36H44N4O

Molecular Weight: 548.78

Molecule Type: Small molecule

Associated Items:

Representations

Canonical SMILES:  O[C@]12C=C(c3nccc4c3[nH]c3ccccc34)[C@@H]3CCN(CCCC/C=C\CC1)C[C@@]31C[C@@H]3/C=C\CCCCN3[C@H]12

Standard InChI:  InChI=1S/C36H44N4O/c41-36-18-10-4-1-2-5-11-20-39-22-17-30(35(25-39)23-26-13-7-3-6-12-21-40(26)34(35)36)29(24-36)32-33-28(16-19-37-32)27-14-8-9-15-31(27)38-33/h1,4,7-9,13-16,19,24,26,30,34,38,41H,2-3,5-6,10-12,17-18,20-23,25H2/b4-1-,13-7-/t26-,30-,34+,35-,36-/m0/s1

Standard InChI Key:  FUCSLKWLLSEMDQ-MKYGIPPKSA-N

Associated Targets(Human)

Glycogen synthase kinase-3 beta 11785 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Cyclin-dependent kinase 5/CDK5 activator 1 3697 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Glycogen synthase kinase-3 alpha 3764 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Cyclin-dependent kinase 1 3927 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

HT-29 80576 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

A549 127892 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

KB 17409 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

LoVo 4724 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Beta-secretase 1 15641 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Voltage-gated calcium channel 146 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

SH-SY5Y 11521 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

HeLa 62764 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

MCF7 126967 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Acyl coenzyme A:cholesterol acyltransferase 2 288 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Acyl coenzyme A:cholesterol acyltransferase 1 857 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

NCI-H1299 3248 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

K562 73714 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Sodium/potassium-transporting ATPase 386 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

C-33-A 287 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

SiHa 2051 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Ca-Ski 420 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Keratinocyte 44 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Homeobox protein SIX1 12 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Casein kinase II alpha 3512 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Associated Targets(non-human)

Mycobacterium tuberculosis 203094 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

P388 20296 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

L1210 27553 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Micrococcus luteus 7463 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Corynebacterium xerosis 106 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Spodoptera littoralis 798 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Bacillus subtilis 32866 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Staphylococcus aureus 210822 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Escherichia coli 133304 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

L5178Y 1809 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Plasmodium falciparum 966862 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Leishmania donovani 89745 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Vero 26788 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Human immunodeficiency virus 1 70413 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Human alphaherpesvirus 2 4932 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Cryptococcus neoformans 21258 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Mycobacterium intracellulare 1532 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Acetylcholinesterase 1035 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Oryzias latipes 115 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Candida albicans 78123 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Pseudomonas aeruginosa 123386 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Aspergillus fumigatus 16427 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Plasmodium berghei 192651 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

MDCK 10148 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Plasmodium yoelii 6656 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Mus musculus 284745 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Tubulin 1327 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Human alphaherpesvirus 1 11089 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

CHO 4503 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Bacillus spizizenii 1898 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Kocuria rhizophila 337 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Salmonella typhimurium 15756 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Proteus hauseri 146 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Sortase A 641 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Protein E6 25 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Protein E7 4 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Protein E6 2 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: Small moleculeTopical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Properties

Molecular Weight: 548.78Molecular Weight (Monoisotopic): 548.3515AlogP: 6.86#Rotatable Bonds: 1
Polar Surface Area: 55.39Molecular Species: BASEHBA: 4HBD: 2
#RO5 Violations: 2HBA (Lipinski): 5HBD (Lipinski): 2#RO5 Violations (Lipinski): 2
CX Acidic pKa: 13.06CX Basic pKa: 11.01CX LogP: 5.80CX LogD: 1.59
Aromatic Rings: 3Heavy Atoms: 41QED Weighted: 0.33Np Likeness Score: 2.07

References

1. Hamann M, Alonso D, Martín-Aparicio E, Fuertes A, Pérez-Puerto MJ, Castro A, Morales S, Navarro ML, Del Monte-Millán M, Medina M, Pennaka H, Balaiah A, Peng J, Cook J, Wahyuono S, Martínez A..  (2007)  Glycogen synthase kinase-3 (GSK-3) inhibitory activity and structure-activity relationship (SAR) studies of the manzamine alkaloids. Potential for Alzheimer's disease.,  70  (9): [PMID:17708655] [10.1021/np060092r]
2. Sayed KA, Khalil AA, Yousaf M, Labadie G, Kumar GM, Franzblau SG, Mayer AM, Avery MA, Hamann MT..  (2008)  Semisynthetic studies on the manzamine alkaloids.,  71  (3): [PMID:18198837] [10.1021/np0703702]
3. Rao KV, Santarsiero BD, Mesecar AD, Schinazi RF, Tekwani BL, Hamann MT..  (2003)  New manzamine alkaloids with activity against infectious and tropical parasitic diseases from an Indonesian sponge.,  66  (6): [PMID:12828469] [10.1021/np020592u]
4. Edrada RA, Proksch P, Wray V, Witte L, Müller WE, Van Soest RW..  (1996)  Four new bioactive manzamine-type alkaloids from the Philippine marine sponge Xestospongia ashmorica.,  59  (11): [PMID:8946747] [10.1021/np9604083]
5. Ibrahim MA, Shilabin AG, Prasanna S, Jacob M, Khan SI, Doerksen RJ, Hamann MT..  (2008)  2-N-Methyl modifications and SAR studies of manzamine A.,  16  (14): [PMID:18595720] [10.1016/j.bmc.2008.05.079]
6. Shilabin AG, Kasanah N, Tekwani BL, Hamann MT..  (2008)  Kinetic studies and bioactivity of potential manzamine prodrugs.,  71  (7): [PMID:18598080] [10.1021/np800163u]
7. Watanabe D, Tsuda M, Kobayashi J..  (1998)  Three new manzamine congeners from amphimedon sponge,  61  (5): [PMID:9599281] [10.1021/np970564p]
8. Ichiba T, Corgiat JM, Scheuer PJ, Kelly-Borges M..  (1994)  8-Hydroxymanzamine A, a beta-carboline alkaloid from a sponge, Pachypellina sp.,  57  (1): [PMID:8158160] [10.1021/np50103a027]
9. Rao KV, Donia MS, Peng J, Garcia-Palomero E, Alonso D, Martinez A, Medina M, Franzblau SG, Tekwani BL, Khan SI, Wahyuono S, Willett KL, Hamann MT..  (2006)  Manzamine B and E and ircinal A related alkaloids from an Indonesian Acanthostrongylophora sponge and their activity against infectious, tropical parasitic, and Alzheimer's diseases.,  69  (7): [PMID:16872140] [10.1021/np0601399]
10. Rao KV, Kasanah N, Wahyuono S, Tekwani BL, Schinazi RF, Hamann MT..  (2004)  Three new manzamine alkaloids from a common Indonesian sponge and their activity against infectious and tropical parasitic diseases.,  67  (8): [PMID:15332848] [10.1021/np0400095]
11. Longley RE, McConnell OJ, Essich E, Harmody D..  (1993)  Evaluation of marine sponge metabolites for cytotoxicity and signal transduction activity.,  56  (6): [PMID:8350092] [10.1021/np50096a015]
12. Khanfar MA, Asal BA, Mudit M, Kaddoumi A, El Sayed KA..  (2009)  The marine natural-derived inhibitors of glycogen synthase kinase-3beta phenylmethylene hydantoins: In vitro and in vivo activities and pharmacophore modeling.,  17  (16): [PMID:19616957] [10.1016/j.bmc.2009.06.054]
13. Wahba AE, Peng J, Kudrimoti S, Tekwani BL, Hamann MT..  (2009)  Structure-activity relationship studies of manzamine A: amidation of positions 6 and 8 of the beta-carboline moiety.,  17  (22): [PMID:19833520] [10.1016/j.bmc.2009.09.026]
14. Peng J, Kudrimoti S, Prasanna S, Odde S, Doerksen RJ, Pennaka HK, Choo YM, Rao KV, Tekwani BL, Madgula V, Khan SI, Wang B, Mayer AM, Jacob MR, Tu LC, Gertsch J, Hamann MT..  (2010)  Structure-activity relationship and mechanism of action studies of manzamine analogues for the control of neuroinflammation and cerebral infections.,  53  (1): [PMID:20017491] [10.1021/jm900672t]
15. Purohit AK, Balish MD, Leichty JJ, Roe A, Ward LM, Mitchell MO, Hsia SC..  (2012)  Antiviral activity and synthesis of quaternized promazine derivatives against HSV-1.,  22  (16): [PMID:22789428] [10.1016/j.bmcl.2012.06.031]
16. Zhang P, Hu HR, Huang ZH, Lei JY, Chu Y, Ye DY..  (2012)  Identification of novel scaffold of benzothiazepinones as non-ATP competitive glycogen synthase kinase-3β inhibitors through virtual screening.,  22  (23): [PMID:23099099] [10.1016/j.bmcl.2012.09.043]
17. Arif JM, Kunhi M, Siddiqui YM, El Sayed KA, Orabi KY, Al-Hazzani A, Al-Ahdal MN, Al-Khodairy FM.  (2004)  ROLE OF INTERMEDIARY BIOMARKERS IN DETERMINING THE ANTICANCER EFFICACY OF MARINE COMPOUNDS,  13  (6): [10.1007/s00044-004-0054-2]
18. Eguchi K, Fujiwara Y, Hayashida A, Horlad H, Kato H, Rotinsulu H, Losung F, Mangindaan RE, de Voogd NJ, Takeya M, Tsukamoto S..  (2013)  Manzamine A, a marine-derived alkaloid, inhibits accumulation of cholesterol ester in macrophages and suppresses hyperlipidemia and atherosclerosis in vivo.,  21  (13): [PMID:23665143] [10.1016/j.bmc.2013.04.025]
19. El-Desoky AH, Kato H, Eguchi K, Kawabata T, Fujiwara Y, Losung F, Mangindaan RE, de Voogd NJ, Takeya M, Yokosawa H, Tsukamoto S..  (2014)  Acantholactam and pre-neo-kauluamine, manzamine-related alkaloids from the Indonesian marine sponge Acanthostrongylophora ingens.,  77  (6): [PMID:24902064] [10.1021/np500290a]
20. Chatwichien J, Basu S, Budina-Kolomets A, Murphy ME, Winkler JD..  (2016)  PUMA-dependent apoptosis in NSCLC cancer cells by a dimeric β-carboline.,  26  (20): [PMID:27650927] [10.1016/j.bmcl.2016.09.030]
21. Chadha N, Silakari O..  (2017)  Indoles as therapeutics of interest in medicinal chemistry: Bird's eye view.,  134  [PMID:28412530] [10.1016/j.ejmech.2017.04.003]
22. Kim CK, Riswanto R, Won TH, Kim H, Elya B, Sim CJ, Oh DC, Oh KB, Shin J..  (2017)  Manzamine Alkaloids from an Acanthostrongylophora sp. Sponge.,  80  (5): [PMID:28452477] [10.1021/acs.jnatprod.7b00121]
23. Hou XM, Wang CY, Gerwick WH, Shao CL..  (2019)  Marine natural products as potential anti-tubercular agents.,  165  [PMID:30685527] [10.1016/j.ejmech.2019.01.026]
24. Karan D, Dubey S, Pirisi L, Nagel A, Pina I, Choo YM, Hamann MT..  (2020)  The Marine Natural Product Manzamine A Inhibits Cervical Cancer by Targeting the SIX1 Protein.,  83  (2): [PMID:32022559] [10.1021/acs.jnatprod.9b00577]
25. Kamboj A, Sihag B, Brar DS, Kaur A, Salunke DB..  (2021)  Structure activity relationship in β-carboline derived anti-malarial agents.,  221  [PMID:34058709] [10.1016/j.ejmech.2021.113536]
26. Lee S, Sperry J..  (2022)  Isolation and biological activity of azocine and azocane alkaloids.,  54  [PMID:34923389] [10.1016/j.bmc.2021.116560]
27. Luo B, Song X..  (2021)  A comprehensive overview of β-carbolines and its derivatives as anticancer agents.,  224  [PMID:34332400] [10.1016/j.ejmech.2021.113688]
28. Singh S, Pathak N, Fatima E, Negi AS..  (2021)  Plant isoquinoline alkaloids: Advances in the chemistry and biology of berberine.,  226  [PMID:34536668] [10.1016/j.ejmech.2021.113839]
29. Dai J, Dan W, Schneider U, Wang J..  (2018)  β-Carboline alkaloid monomers and dimers: Occurrence, structural diversity, and biological activities.,  157  [PMID:30125723] [10.1016/j.ejmech.2018.08.027]

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