3-(4-(((2-(1H-indol-2-yl)ethyl)(2-hydroxyethyl)amino)methyl)phenyl)-N-hydroxyacrylamide

ID: ALA403323

Cas Number: 591207-53-3

PubChem CID: 44456564

Max Phase: Preclinical

Molecular Formula: C22H25N3O3

Molecular Weight: 379.46

Molecule Type: Small molecule

This compound is available for customization.

Associated Items:

Names and Identifiers

Canonical SMILES:  O=C(/C=C/c1ccc(CN(CCO)CCc2cc3ccccc3[nH]2)cc1)NO

Standard InChI:  InChI=1S/C22H25N3O3/c26-14-13-25(12-11-20-15-19-3-1-2-4-21(19)23-20)16-18-7-5-17(6-8-18)9-10-22(27)24-28/h1-10,15,23,26,28H,11-14,16H2,(H,24,27)/b10-9+

Standard InChI Key:  FGJCGXHQLHHNFO-MDZDMXLPSA-N

Molfile:  

     RDKit          2D

 28 30  0  0  0  0  0  0  0  0999 V2000
    7.8618   -6.4434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2446   -7.1769    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.0694   -7.2111    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3010   -5.7475    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.1246   -5.7782    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.5122   -6.5081    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3262   -6.3650    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   10.4416   -5.5466    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.6990   -5.1840    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.1703   -5.1596    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.8697   -5.5971    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.5983   -5.2101    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   13.2977   -5.6476    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.6275   -4.3856    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.3561   -3.9986    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.3852   -3.1741    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   14.0264   -5.2606    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.7226   -5.7010    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.4507   -5.3147    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.4803   -4.4893    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.7759   -4.0518    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.0506   -4.4406    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.2084   -4.1013    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.9084   -4.5379    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.6365   -4.1500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.3366   -4.5865    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   17.6646   -3.3254    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   19.0647   -4.1986    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  3  6  2  0
 12 14  1  0
  1  2  2  0
 14 15  1  0
  5  4  2  0
 15 16  1  0
  6  7  1  0
 13 17  1  0
  7  8  1  0
 17 18  2  0
  8  9  2  0
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  9  5  1  0
 19 20  2  0
  4  1  1  0
 20 21  1  0
  8 10  1  0
 21 22  2  0
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  5  6  1  0
 20 23  1  0
 10 11  1  0
 23 24  2  0
 24 25  1  0
 11 12  1  0
 25 26  1  0
  2  3  1  0
 25 27  2  0
 12 13  1  0
 26 28  1  0
M  END

Associated Targets(Human)

HDAC9 Tclin Histone deacetylase 9 (708 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
HDAC1 Tclin Histone deacetylase 1 (10854 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
HDAC2 Tclin Histone deacetylase 2 (3971 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
HDAC3 Tclin Histone deacetylase 3 (3654 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
HDAC4 Tclin Histone deacetylase 4 (2328 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
HDAC5 Tclin Histone deacetylase 5 (941 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
HDAC7 Tclin Histone deacetylase 7 (1047 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
HDAC6 Tclin Histone deacetylase 6 (20808 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
HDAC8 Tclin Histone deacetylase 8 (4516 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: Small moleculeTopical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Calculated Properties

Molecular Weight: 379.46Molecular Weight (Monoisotopic): 379.1896AlogP: 2.72#Rotatable Bonds: 9
Polar Surface Area: 88.59Molecular Species: BASEHBA: 4HBD: 4
#RO5 Violations: HBA (Lipinski): 6HBD (Lipinski): 4#RO5 Violations (Lipinski):
CX Acidic pKa: 9.66CX Basic pKa: 8.89CX LogP: 1.98CX LogD: 0.78
Aromatic Rings: 3Heavy Atoms: 28QED Weighted: 0.26Np Likeness Score: -0.62

References

1. Paris M, Porcelloni M, Binaschi M, Fattori D..  (2008)  Histone deacetylase inhibitors: from bench to clinic.,  51  (6): [PMID:18247554] [10.1021/jm7011408]

Source