N-(2-aminoethyl)-4-((S)-3-(((R)-1-(naphthalen-1-yl)ethyl)amino)pyrrolidin-1-yl)benzamide

ID: ALA4060025

PubChem CID: 137635178

Max Phase: Preclinical

Molecular Formula: C25H30N4O

Molecular Weight: 402.54

Molecule Type: Small molecule

Names and Identifiers

Canonical SMILES:  C[C@@H](N[C@H]1CCN(c2ccc(C(=O)NCCN)cc2)C1)c1cccc2ccccc12

Standard InChI:  InChI=1S/C25H30N4O/c1-18(23-8-4-6-19-5-2-3-7-24(19)23)28-21-13-16-29(17-21)22-11-9-20(10-12-22)25(30)27-15-14-26/h2-12,18,21,28H,13-17,26H2,1H3,(H,27,30)/t18-,21+/m1/s1

Standard InChI Key:  JBAPDYRFFBXITI-NQIIRXRSSA-N

Molfile:  

     RDKit          2D

 30 33  0  0  0  0  0  0  0  0999 V2000
   15.2707   -4.5193    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4866   -3.6484    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4854   -4.4680    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9003   -3.6448    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1917   -3.2396    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9031   -4.4675    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1927   -4.8748    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1911   -5.6918    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8993   -6.1026    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.6105   -5.6903    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.6086   -4.8746    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3158   -4.4651    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0240   -4.8728    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    9.3147   -3.6479    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7312   -4.4633    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4785   -4.7928    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.0245   -4.1848    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   11.6150   -3.4775    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.8159   -3.6486    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.8374   -4.2691    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.1665   -5.0166    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.9785   -5.1012    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.4588   -4.4390    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.1214   -3.6901    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.3103   -3.6091    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.6061   -5.2680    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   15.1275   -5.9304    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.4618   -6.6760    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.9832   -7.3384    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   15.7483   -3.8562    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  2  3  2  0
  3  7  1  0
  6  4  1  0
  4  5  2  0
  5  2  1  0
  6  7  1  0
  7  8  2  0
  8  9  1  0
  9 10  2  0
 10 11  1  0
 11  6  2  0
 11 12  1  0
 12 13  1  0
 12 14  1  1
 15 13  1  1
 15 16  1  0
 16 17  1  0
 17 18  1  0
 18 19  1  0
 19 15  1  0
 17 20  1  0
 20 21  2  0
 21 22  1  0
 22 23  2  0
 23 24  1  0
 24 25  2  0
 25 20  1  0
 23  1  1  0
  1 26  1  0
 26 27  1  0
 27 28  1  0
 28 29  1  0
  1 30  2  0
M  END

Alternative Forms

1. Parent:

   

   ALA4060025

   ---

Molecule Features

Natural Product: No

Oral: No

Chemical Probe: No

Parenteral: No

Molecule Type: Small molecule

Topical: No

First In Class: No

Black Box: No

Chirality: No

Availability: No

Prodrug: No

Calculated Properties

Molecular Weight: 402.54

Molecular Weight (Monoisotopic): 402.2420

AlogP: 3.46

#Rotatable Bonds: 7

Polar Surface Area: 70.39

Molecular Species: BASE

HBA: 4

HBD: 3

#RO5 Violations: ┄

HBA (Lipinski): 5

HBD (Lipinski): 4

#RO5 Violations (Lipinski): ┄

CX Acidic pKa: ┄

CX Basic pKa: 9.64

CX LogP: 3.07

CX LogD: -0.71

Aromatic Rings: 3

Heavy Atoms: 30

QED Weighted: 0.57

Np Likeness Score: -1.21

References

1. Sparks SM, Spearing PK, Diaz CJ, Cowan DJ, Jayawickreme C, Chen G, Rimele TJ, Generaux C, Harston LT, Roller SG..  (2017)  Identification of potent, nonabsorbable agonists of the calcium-sensing receptor for GI-specific administration.,  27  (20): [PMID:28916340] [10.1016/j.bmcl.2017.09.008]

Source

Source(1):

• Scientific Literature