N1-(4-(dimethylamino)phenyl)-2,2,3,3,4,4,5,5,6,6,7,7-dodecafluoro-N8-hydroxyoctanediamide

ID: ALA4066515

PubChem CID: 137631704

Max Phase: Preclinical

Molecular Formula: C16H13F12N3O3

Molecular Weight: 523.27

Molecule Type: Small molecule

Associated Items:

This compound is not in our inventory system

Names and Identifiers

Canonical SMILES:  CN(C)c1ccc(NC(=O)C(F)(F)C(F)(F)C(F)(F)C(F)(F)C(F)(F)C(F)(F)C(=O)NO)cc1

Standard InChI:  InChI=1S/C16H13F12N3O3/c1-31(2)8-5-3-7(4-6-8)29-9(32)11(17,18)13(21,22)15(25,26)16(27,28)14(23,24)12(19,20)10(33)30-34/h3-6,34H,1-2H3,(H,29,32)(H,30,33)

Standard InChI Key:  KKMDVAKOVBBMGZ-UHFFFAOYSA-N

Molfile:  

     RDKit          2D

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    9.1079  -20.7765    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.8156  -20.3679    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
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    2.7435  -19.5496    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0366  -19.1411    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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   10.5233  -20.7765    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.6196  -19.1421    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    0.6186  -18.3249    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.0941  -19.5516    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  0
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 32 34  1  0
M  END

Alternative Forms

  1. Parent:

    ALA4066515

    ---

Associated Targets(Human)

HDAC5 Tclin Histone deacetylase 5 (941 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
HDAC4 Tclin Histone deacetylase 4 (2328 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
HDAC8 Tclin Histone deacetylase 8 (4516 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
HDAC7 Tclin Histone deacetylase 7 (1047 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
HDAC6 Tclin Histone deacetylase 6 (20808 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
HDAC1 Tclin Histone deacetylase 1 (10854 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: Small moleculeTopical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Calculated Properties

Molecular Weight: 523.27Molecular Weight (Monoisotopic): 523.0765AlogP: 4.01#Rotatable Bonds: 9
Polar Surface Area: 81.67Molecular Species: NEUTRALHBA: 4HBD: 3
#RO5 Violations: 1HBA (Lipinski): 6HBD (Lipinski): 3#RO5 Violations (Lipinski): 1
CX Acidic pKa: 8.26CX Basic pKa: 4.52CX LogP: 4.67CX LogD: 4.62
Aromatic Rings: 1Heavy Atoms: 34QED Weighted: 0.26Np Likeness Score: -0.75

References

1. Meyners C, Wolff B, Kleinschek A, Krämer A, Meyer-Almes FJ..  (2017)  Perfluorinated hydroxamic acids are potent and selective inhibitors of HDAC-like enzymes from Pseudomonas aeruginosa.,  27  (7): [PMID:28259626] [10.1016/j.bmcl.2017.02.050]

Source