Carbocyanine derivative

ID: ALA414972

PubChem CID: 44303671

Max Phase: Preclinical

Molecular Formula: C90H104N13O15S2+

Molecular Weight: 1672.03

Molecule Type: Small molecule

This compound is available for customization.

Associated Items:

Names and Identifiers

Canonical SMILES:  C[C@@H](O)[C@H](NC(=O)[C@H]1CSSC[C@H](NC(=O)[C@@H](Cc2ccccc2)NNC(=O)CC[N+]2=C(/C=C/C=C/C=C/C=C3/N(CCC(=O)O)c4ccc5ccccc5c4C3(C)C)C(C)(C)c3c2ccc2ccccc32)C(=O)N[C@@H](Cc2ccc(O)cc2)C(=O)N[C@H](Cc2c[nH]c3ccccc23)C(=O)N[C@@H](CCCCN)C(=O)N[C@H]([C@@H](C)O)C(=O)N1)C(=O)O

Standard InChI:  InChI=1S/C90H103N13O15S2/c1-53(104)79-87(116)97-70(86(115)99-80(54(2)105)88(117)118)52-120-119-51-69(85(114)94-66(47-56-34-38-60(106)39-35-56)82(111)95-67(49-59-50-92-64-30-20-19-27-61(59)64)83(112)93-65(81(110)98-79)31-21-22-44-91)96-84(113)68(48-55-23-11-10-12-24-55)100-101-75(107)42-45-102-71-40-36-57-25-15-17-28-62(57)77(71)89(3,4)73(102)32-13-8-7-9-14-33-74-90(5,6)78-63-29-18-16-26-58(63)37-41-72(78)103(74)46-43-76(108)109/h7-20,23-30,32-41,50,53-54,65-70,79-80,92,100,104-105H,21-22,31,42-49,51-52,91H2,1-6H3,(H10-,93,94,95,96,97,98,99,101,106,107,108,109,110,111,112,113,114,115,116,117,118)/p+1/t53-,54-,65+,66+,67-,68-,69+,70-,79-,80+/m1/s1

Standard InChI Key:  XMIAOODMIJLAHW-HXWWZQOFSA-O

Molfile:  

     RDKit          2D

121131  0  0  1  0  0  0  0  0999 V2000
    4.7167   -0.7000    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    9.9292   -0.6417    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.1917   -0.4042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3625    0.2333    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3917   -0.3750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2417   -0.3917    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2375    0.2083    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1917    0.2000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3917    0.2875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.4375   -0.3167    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5375   -8.5500    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.0500   -8.1917    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6917   -7.7125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5042   -7.1375    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.7542   -5.4667    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    7.3042   -7.1250    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.2750   -5.1167    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5292   -6.9125    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.2792   -8.5417    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.1042   -8.7292    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9375   -6.8250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3000   -6.5250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7667   -8.1875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5042   -6.5417    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0417   -8.4375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9042   -6.4417    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7000   -4.9292    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3167   -3.9625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1167   -7.7000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7875   -4.3417    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.2667   -3.3542    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1125   -5.9542    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7167   -1.3000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.7042   -9.1542    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    8.6292   -8.5542    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.5625   -7.2917    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.9625   -1.2417    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.9042    0.6125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6667    0.4958    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7125   -8.7292    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6542   -7.9667    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7500   -8.9625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6667   -0.7042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.9792   -0.5792    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7292   -3.1000    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.2042   -1.6042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2042   -2.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.5000   -1.5125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.5250   -5.1167    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    4.0417   -5.4750    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
   10.5292   -2.1125    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.8792   -0.6792    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.1542   -9.4042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7625   -0.6917    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7292   -2.5000    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.1542   -7.9792    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7667   -3.0250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5417   -4.5792    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.9625   -9.1792    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.8917   -6.4292    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.1917   -8.6125    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.6500   -5.6792    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6917   -5.8792    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.8167   -4.3042    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.6917   -5.9667    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0917   -4.9292    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7792   -7.8542    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.6250   -8.6250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3542   -0.3792    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2792   -0.3917    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8000   -0.6875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3167   -0.3875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8375   -0.6792    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1542    0.2000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4417    0.3458    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.7167   -6.2625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1542   -0.4042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4792   -0.2542    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6875   -2.5042    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.0667   -2.3792    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.3292    0.8333    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.7625    0.1958    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2500   -5.5875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8375    0.2083    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2292    0.8083    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.9667   -7.2000    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.4417   -5.3917    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0292   -2.4375    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.3125   -3.2792    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.4625   -5.0250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.6292   -6.0542    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0667  -11.2667    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    9.2250   -5.9625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.0542   -4.9250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7792   -9.2042    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    1.1250   -6.1667    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.0292   -5.3042    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.8750    1.2083    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6667    1.0958    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1625   -9.0917    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.8042   -9.3250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9792   -9.9792    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.9375    0.6708    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6417    0.4958    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9667  -10.6792    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0417   -8.4667    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0917   -5.7917    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3542   -3.8792    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8042   -2.9500    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3417   -9.7000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4375  -10.3000    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1500    1.3875    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.3750    1.5333    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9792   -9.6667    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3917  -10.1042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6292    1.0833    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.9042    1.2625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3500   -3.2042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8917   -4.1417    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.3917   -3.8042    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1305   -9.1885    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
  2  5  1  0
  3  1  1  0
  4  5  1  0
  5 52  2  0
  6  1  2  0
  7  6  1  0
  8  3  2  0
  9  4  1  0
 10  2  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 24  1  0
 15 17  1  0
 16 22  1  0
 17 27  1  0
 18 26  1  0
 19 23  1  0
 20 11  1  0
 21 18  1  6
 22 32  1  0
 23 29  1  0
 24 65  1  0
 25 41  1  0
 24 26  1  1
 27 30  1  6
 28 31  1  0
 29 16  1  0
 30 28  1  0
 31 45  1  6
 32 15  1  0
 33  1  1  0
 34 35  1  0
 35 25  2  0
 36 21  1  0
 37  2  1  0
 38  9  1  0
 39  8  1  0
 40 19  1  0
 29 41  1  6
 42 25  1  0
 43  3  1  0
 44 10  1  0
 45 55  1  0
 46 33  1  0
 47 46  1  0
 48 37  1  0
 49 66  1  0
 50 49  1  0
 51 48  1  0
 52 69  1  0
 53 42  2  0
 54  6  1  0
 55 47  1  0
 56 13  2  0
 31 57  1  0
 58 17  2  0
 59 20  2  0
 60 22  2  0
 61 23  2  0
 32 62  1  1
 63 26  2  0
 64 28  2  0
 65 50  1  0
 27 66  1  0
 67 36  2  0
 12 68  1  0
 69 73  2  0
 70 54  2  0
 71 70  1  0
 72 71  2  0
 73 72  1  0
 74 77  1  0
 75 38  2  0
 21 76  1  0
 77 43  2  0
 78 44  2  0
 79 47  2  0
 80 51  2  0
 81  4  1  0
 82  4  1  0
 83 62  1  0
 84  7  1  0
 85  7  1  0
 86 36  1  0
 87 93  2  0
 88 51  1  0
 89 57  1  0
 90 83  1  0
 91 83  2  0
 92105  1  0
 93 91  1  0
 94 90  2  0
 68 95  1  6
 76 96  1  6
 97 87  1  0
 98 38  1  0
 99 39  1  0
100 42  1  0
 40101  1  1
102 53  1  0
103 75  1  0
104 74  1  0
105111  1  0
106 68  1  0
107 76  1  0
108 89  2  0
109 89  1  0
110101  1  0
111110  1  0
112 99  2  0
113 98  2  0
114100  2  0
115114  1  0
116104  2  0
117113  1  0
118109  2  0
119108  1  0
120118  1  0
  8  7  1  0
 39 74  2  0
112116  1  0
119120  2  0
  9 10  2  0
 75 78  1  0
117103  2  0
 94 87  1  0
 40 20  1  0
 53 34  1  0
102115  2  0
 12121  1  1
M  CHG  1   1   1
M  END

Associated Targets(non-human)

Sstr2 Somatostatin receptor (172 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: Small moleculeTopical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Biocomponents

Calculated Properties

Molecular Weight: 1672.03Molecular Weight (Monoisotopic): 1670.7211AlogP: #Rotatable Bonds:
Polar Surface Area: Molecular Species: HBA: HBD:
#RO5 Violations: HBA (Lipinski): HBD (Lipinski): #RO5 Violations (Lipinski):
CX Acidic pKa: CX Basic pKa: CX LogP: CX LogD:
Aromatic Rings: Heavy Atoms: QED Weighted: Np Likeness Score:

References

1. Achilefu S, Jimenez HN, Dorshow RB, Bugaj JE, Webb EG, Wilhelm RR, Rajagopalan R, Johler J, Erion JL..  (2002)  Synthesis, in vitro receptor binding, and in vivo evaluation of fluorescein and carbocyanine peptide-based optical contrast agents.,  45  (10): [PMID:11985468] [10.1021/jm010519l]

Source