N-((2S,3R,4R,5S,6R)-2-((2R,3R,4R,5R,6S)-4-(benzyloxy)-5-hydroxy-2-(hydroxymethyl)-6-(4-methoxyphenoxy)tetrahydro-2H-pyran-3-yloxy)-5-(dihydroxyhydrosulfinyloxy)-6-((dihydroxyhydrosulfinyloxy)methyl)-4-hydroxytetrahydro-2H-pyran-3-yl)acetamide

ID: ALA4207050

Max Phase: Preclinical

Molecular Formula: C28H41NO18S2

Molecular Weight: 743.76

Molecule Type: Small molecule

This compound is available for customization.

Associated Items:

Names and Identifiers

Canonical SMILES:  COc1ccc(O[C@@H]2O[C@H](CO)[C@@H](O[C@@H]3O[C@H](CO[SH+]([O-])(O)O)[C@@H](O[SH+]([O-])(O)O)[C@H](O)[C@H]3NC(C)=O)[C@H](OCc3ccccc3)[C@H]2O)cc1

Standard InChI:  InChI=1S/C28H41NO18S2/c1-15(31)29-21-22(32)24(47-49(37,38)39)20(14-42-48(34,35)36)45-27(21)46-25-19(12-30)44-28(43-18-10-8-17(40-2)9-11-18)23(33)26(25)41-13-16-6-4-3-5-7-16/h3-11,19-28,30,32-35,37-38,48-49H,12-14H2,1-2H3,(H,29,31)/t19-,20-,21-,22-,23-,24-,25-,26-,27+,28-/m1/s1

Standard InChI Key:  RMJVKYQIYDOASF-QLJCWTAQSA-N

Molfile:  

     RDKit          2D

 50 53  0  0  0  0  0  0  0  0999 V2000
   14.8545  -13.6130    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   14.8545  -15.2523    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.4341  -16.0721    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.0178  -15.2524    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.4340  -13.6130    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.3949  -14.1420    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   14.1484  -14.0249    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.1484  -14.8445    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.4340  -15.2524    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.7280  -14.8446    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.7280  -14.0249    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.0178  -13.6131    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.3576  -16.0714    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.7704  -16.7813    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    9.1788  -16.0689    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.7361  -13.5992    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.1489  -14.3091    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
   10.5573  -13.5967    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.3156  -17.1922    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   10.8959  -18.0119    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    9.4795  -17.1922    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.8958  -15.5528    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.6102  -15.9646    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.6102  -16.7843    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.8958  -17.1922    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.1898  -16.7844    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.1898  -15.9647    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.4795  -15.5529    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.4538  -14.7367    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   10.8688  -14.7031    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    8.0641  -17.1888    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.3982  -16.1746    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   12.3151  -18.0094    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.0226  -18.4184    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.6072  -18.4175    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   14.1419  -16.4806    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.1420  -17.2978    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.4314  -17.7025    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.4312  -18.5189    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.1395  -18.9283    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.8495  -18.5152    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.8463  -17.7001    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.5641  -14.0184    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.5647  -14.8343    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.2734  -15.2397    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.9802  -14.8279    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.9739  -14.0065    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.2647  -13.6048    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.6903  -15.2324    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   17.6950  -16.0495    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  6 12  1  0
 11  5  1  0
  5  7  1  0
  7  8  1  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  1
  7  1  1  1
  8  2  1  6
  9  3  1  1
 10  4  1  6
 14 13  1  0
 15 14  1  0
 17 16  1  0
 18 17  1  0
 27 22  1  0
 22 23  1  0
 23 24  1  0
 24 25  1  0
 25 26  1  0
 26 27  1  0
 27 28  1  1
 24 19  1  6
 25 20  1  1
 26 21  1  6
 28 29  1  0
 29 17  1  0
 17 30  1  0
 21 14  1  0
 14 31  1  0
 23 32  1  6
 19 33  1  0
 33 34  1  0
 33 35  2  0
 23  4  1  0
  3 36  1  0
 36 37  1  0
 37 38  2  0
 38 39  1  0
 39 40  2  0
 40 41  1  0
 41 42  2  0
 42 37  1  0
  1 43  1  0
 43 44  2  0
 44 45  1  0
 45 46  2  0
 46 47  1  0
 47 48  2  0
 48 43  1  0
 46 49  1  0
 49 50  1  0
M  CHG  4  14   1  15  -1  16  -1  17   1
M  END

Alternative Forms

  1. Parent:

    ALA4207050

    ---

Associated Targets(Human)

MDK Tchem Midkine (16 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: Small moleculeTopical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Calculated Properties

Molecular Weight: 743.76Molecular Weight (Monoisotopic): 743.1765AlogP: -1.13#Rotatable Bonds: 15
Polar Surface Area: 290.67Molecular Species: NEUTRALHBA: 18HBD: 8
#RO5 Violations: 3HBA (Lipinski): 19HBD (Lipinski): 8#RO5 Violations (Lipinski): 3
CX Acidic pKa: 11.68CX Basic pKa: CX LogP: -0.68CX LogD: -0.68
Aromatic Rings: 2Heavy Atoms: 49QED Weighted: 0.08Np Likeness Score: 0.68

References

1. Maza S, Gandia-Aguado N, de Paz JL, Nieto PM..  (2018)  Fluorous-tag assisted synthesis of a glycosaminoglycan mimetic tetrasaccharide as a high-affinity FGF-2 and midkine ligand.,  26  (5): [PMID:29409708] [10.1016/j.bmc.2018.01.022]

Source