5-(2-chlorobenzyl)-3,5-dimethyl-4-hydroxy-5H-thiophen-2-one

ID: ALA436318

Max Phase: Preclinical

Molecular Formula: C13H13ClO2S

Molecular Weight: 268.76

Molecule Type: Small molecule

Names and Identifiers

Canonical SMILES:  CC1=C(O)C(C)(Cc2ccccc2Cl)SC1=O

Standard InChI:  InChI=1S/C13H13ClO2S/c1-8-11(15)13(2,17-12(8)16)7-9-5-3-4-6-10(9)14/h3-6,15H,7H2,1-2H3

Standard InChI Key:  WYPAHQAZRZTKPB-UHFFFAOYSA-N

Molfile:  

     RDKit          2D

 17 18  0  0  0  0  0  0  0  0999 V2000
    6.5680    2.6201    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    6.1535    1.3386    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9716    1.3391    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2322    2.1237    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0236    2.3747    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.6617    0.6730    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.4540    0.6698    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9083    2.1917    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9042    3.0208    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1558    1.8538    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4400    2.2639    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.4392    3.0889    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7242    3.4989    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0102    3.0840    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.0156    2.2547    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.7311    1.8484    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1529    3.5027    0.0000 Cl  0  0  0  0  0  0  0  0  0  0  0  0
  3  4  1  0
  8  9  1  0
  4  1  1  0
  8 10  1  0
 10 11  1  0
  4  5  2  0
 11 12  2  0
  1  8  1  0
 12 13  1  0
  2  6  1  0
 13 14  2  0
  8  2  1  0
 14 15  1  0
  3  7  1  0
 15 16  2  0
 16 11  1  0
  2  3  2  0
 12 17  1  0
M  END

Alternative Forms

1. Parent:

   

   ALA436318

   ---

Molecule Features

Natural Product: No

Oral: No

Chemical Probe: No

Parenteral: No

Molecule Type: Small molecule

Topical: No

First In Class: No

Black Box: No

Chirality: No

Availability: No

Prodrug: No

Calculated Properties

Molecular Weight: 268.76

Molecular Weight (Monoisotopic): 268.0325

AlogP: 3.75

#Rotatable Bonds: 2

Polar Surface Area: 37.30

Molecular Species: ACID

HBA: 3

HBD: 1

#RO5 Violations: ┄

HBA (Lipinski): 2

HBD (Lipinski): 1

#RO5 Violations (Lipinski): ┄

CX Acidic pKa: 6.41

CX Basic pKa: ┄

CX LogP: 3.66

CX LogD: 2.63

Aromatic Rings: 1

Heavy Atoms: 17

QED Weighted: 0.89

Np Likeness Score: -0.06

References

1. Kim P, Zhang YM, Shenoy G, Nguyen QA, Boshoff HI, Manjunatha UH, Goodwin MB, Lonsdale J, Price AC, Miller DJ, Duncan K, White SW, Rock CO, Barry CE, Dowd CS..  (2006)  Structure-activity relationships at the 5-position of thiolactomycin: an intact (5R)-isoprene unit is required for activity against the condensing enzymes from Mycobacterium tuberculosis and Escherichia coli.,  49  (1): [PMID:16392800] [10.1021/jm050825p]

Source

Source(1):

• Scientific Literature