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(R)-4-(4-(1H-pyrrolo[3,2-b]pyridine-3-carbonyl)benzyl)-8-chloro-3-(pyridin-2-ylmethyl)-3,4-dihydro-1H-benzo[e][1,4]diazepine-2,5-dione ID: ALA4452983
PubChem CID: 132218314
Max Phase: Preclinical
Molecular Formula: C30H22ClN5O3
Molecular Weight: 535.99
Molecule Type: Unknown
This compound is available for customization.
Associated Items:
Names and Identifiers Canonical SMILES: O=C(c1ccc(CN2C(=O)c3ccc(Cl)cc3NC(=O)[C@H]2Cc2ccccn2)cc1)c1c[nH]c2cccnc12
Standard InChI: InChI=1S/C30H22ClN5O3/c31-20-10-11-22-25(14-20)35-29(38)26(15-21-4-1-2-12-32-21)36(30(22)39)17-18-6-8-19(9-7-18)28(37)23-16-34-24-5-3-13-33-27(23)24/h1-14,16,26,34H,15,17H2,(H,35,38)/t26-/m1/s1
Standard InChI Key: AOGRUGIWISIXLO-AREMUKBSSA-N
Molfile:
RDKit 2D
39 44 0 0 0 0 0 0 0 0999 V2000
35.2823 -11.6057 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
35.2811 -12.4294 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
35.9933 -12.8425 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
35.9915 -11.1969 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
36.7053 -12.4248 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
36.7042 -11.6021 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
37.3462 -11.0852 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
37.3516 -12.9404 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
38.1523 -11.2612 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
38.1578 -12.7533 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
38.5136 -12.0047 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
37.1731 -13.7420 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
38.6629 -10.6157 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
39.3349 -12.0012 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
39.7405 -11.2876 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
38.6754 -13.3932 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
39.4935 -13.3929 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
40.5591 -11.2862 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
40.9687 -10.5734 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
40.5528 -9.8624 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
39.7273 -9.8686 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
39.3256 -10.5819 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
39.8988 -14.0999 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
40.7161 -14.0999 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
41.1278 -13.3943 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
40.7120 -12.6831 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
39.8961 -12.6866 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
41.9491 -13.3929 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
42.3565 -12.6804 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
34.5703 -11.1973 0.0000 Cl 0 0 0 0 0 0 0 0 0 0 0 0
42.3574 -14.0975 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
42.0320 -14.8436 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
42.6421 -15.3916 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
43.1761 -14.1830 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
43.3492 -14.9803 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
44.1233 -15.2291 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
44.7250 -14.6815 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
44.5515 -13.8819 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
43.7776 -13.6369 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
1 2 2 0
2 3 1 0
3 5 2 0
6 4 2 0
4 1 1 0
5 6 1 0
6 7 1 0
5 8 1 0
7 9 1 0
8 10 1 0
9 11 1 0
10 11 1 0
8 12 2 0
9 13 2 0
11 14 1 1
14 15 1 0
10 16 1 0
16 17 1 0
15 18 2 0
18 19 1 0
19 20 2 0
20 21 1 0
21 22 2 0
22 15 1 0
17 23 2 0
23 24 1 0
24 25 2 0
25 26 1 0
26 27 2 0
27 17 1 0
25 28 1 0
28 29 2 0
1 30 1 0
28 31 1 0
31 32 2 0
32 33 1 0
33 35 1 0
34 31 1 0
34 35 2 0
35 36 1 0
36 37 2 0
37 38 1 0
38 39 2 0
39 34 1 0
M END Associated Targets(non-human) Molecule Features Natural Product: NoOral: NoChemical Probe: NoParenteral: NoMolecule Type: UnknownTopical: NoFirst In Class: NoBlack Box: NoChirality: NoAvailability: NoProdrug: No
Drug Indications MESH ID MESH Heading EFO IDs EFO Terms Max Phase for Indication References
Mechanisms of Action Mechanism of Action Action Type target ID Target Name Target Type Target Organism Binding Site Name References
Calculated Properties Molecular Weight: 535.99Molecular Weight (Monoisotopic): 535.1411AlogP: 5.05#Rotatable Bonds: 6Polar Surface Area: 108.05Molecular Species: NEUTRALHBA: 5HBD: 2#RO5 Violations: 2HBA (Lipinski): 8HBD (Lipinski): 2#RO5 Violations (Lipinski): 2CX Acidic pKa: 11.57CX Basic pKa: 4.59CX LogP: 4.95CX LogD: 4.95Aromatic Rings: 5Heavy Atoms: 39QED Weighted: 0.30Np Likeness Score: -0.91
References 1. Letourneau JJ, Stroke IL, Hilbert DW, Cole AG, Sturzenbecker LJ, Marinelli BA, Quintero JG, Sabalski J, Li Y, Ma L, Pechik I, Stein PD, Webb ML.. (2018) Synthesis and SAR studies of novel benzodiazepinedione-based inhibitors of Clostridium difficile (C. difficile) toxin B (TcdB)., 28 (23-24): [PMID:30392779 ] [10.1016/j.bmcl.2018.10.047 ]