1-Benzyl-4-(n-decylamino)-5-methylpyrimidin-2(1H)-one

ID: ALA4453591

PubChem CID: 148339851

Max Phase: Preclinical

Molecular Formula: C22H33N3O

Molecular Weight: 355.53

Molecule Type: Unknown

Names and Identifiers

Canonical SMILES:  CCCCCCCCCCNc1nc(=O)n(Cc2ccccc2)cc1C

Standard InChI:  InChI=1S/C22H33N3O/c1-3-4-5-6-7-8-9-13-16-23-21-19(2)17-25(22(26)24-21)18-20-14-11-10-12-15-20/h10-12,14-15,17H,3-9,13,16,18H2,1-2H3,(H,23,24,26)

Standard InChI Key:  LGLOGGLSWLOHKC-UHFFFAOYSA-N

Molfile:  

 
     RDKit          2D

 26 27  0  0  0  0  0  0  0  0999 V2000
    3.3210  -12.3734    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3199  -13.1929    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0279  -13.6019    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.7376  -13.1925    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7347  -12.3698    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.0261  -11.9645    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6132  -11.9650    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4459  -13.5999    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.0277  -14.4191    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0237  -11.1473    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.7353  -14.8279    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7310  -15.6433    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4378  -16.0520    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1465  -15.6435    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1441  -14.8221    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4368  -14.4171    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7302  -10.7366    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4391  -11.1431    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1456  -10.7324    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8545  -11.1389    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5610  -10.7282    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2699  -11.1347    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.9764  -10.7240    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.6853  -11.1304    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3918  -10.7197    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.1007  -11.1262    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  2  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  2  0
  6  1  1  0
  1  7  1  0
  4  8  2  0
  3  9  1  0
  6 10  1  0
  9 11  1  0
 11 12  2  0
 12 13  1  0
 13 14  2  0
 14 15  1  0
 15 16  2  0
 16 11  1  0
 10 17  1  0
 17 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  1  0
 23 24  1  0
 24 25  1  0
 25 26  1  0
M  END

Alternative Forms

1. Parent:

   

   ALA4453591

   ---

Molecule Features

Natural Product: No

Oral: No

Chemical Probe: No

Parenteral: No

Molecule Type: Unknown

Topical: No

First In Class: No

Black Box: No

Chirality: No

Availability: No

Prodrug: No

Calculated Properties

Molecular Weight: 355.53

Molecular Weight (Monoisotopic): 355.2624

AlogP: 5.15

#Rotatable Bonds: 12

Polar Surface Area: 46.92

Molecular Species: NEUTRAL

HBA: 4

HBD: 1

#RO5 Violations: 1

HBA (Lipinski): 4

HBD (Lipinski): 1

#RO5 Violations (Lipinski): 1

CX Acidic pKa: ┄

CX Basic pKa: ┄

CX LogP: 5.38

CX LogD: 5.38

Aromatic Rings: 2

Heavy Atoms: 26

QED Weighted: 0.54

Np Likeness Score: -0.68

References

1. Trifonov L, Nudelman V, Zhenin M, Matsree E, Afri M, Schmerling B, Cohen G, Jozwiak K, Weitman M, Korshin E, Senderowitz H, Shainberg A, Hochhauser E, Gruzman A..  (2018)  Structurally Simple, Readily Available Peptidomimetic 1-Benzyl-5-methyl-4-( n-octylamino)pyrimidin-2(1 H)-one Exhibited Efficient Cardioprotection in a Myocardial Ischemia (MI) Mouse Model.,  61  (24): [PMID:30507195] [10.1021/acs.jmedchem.8b01471]

Source

Source(1):

• Scientific Literature