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(R)-4-((8-chloro-2,5-dioxo-3-(pyridin-2-ylmethyl)-2,3-dihydro-1H-benzo[e][1,4]diazepin-4(5H)-yl)methyl)-2-methyl-N-(5-(trifluoromethyl)pyridin-2-yl)benzamide ID: ALA4456808
PubChem CID: 132214420
Max Phase: Preclinical
Molecular Formula: C30H23ClF3N5O3
Molecular Weight: 593.99
Molecule Type: Unknown
This compound is available for customization.
Associated Items:
Names and Identifiers Canonical SMILES: Cc1cc(CN2C(=O)c3ccc(Cl)cc3NC(=O)[C@H]2Cc2ccccn2)ccc1C(=O)Nc1ccc(C(F)(F)F)cn1
Standard InChI: InChI=1S/C30H23ClF3N5O3/c1-17-12-18(5-8-22(17)27(40)38-26-10-6-19(15-36-26)30(32,33)34)16-39-25(14-21-4-2-3-11-35-21)28(41)37-24-13-20(31)7-9-23(24)29(39)42/h2-13,15,25H,14,16H2,1H3,(H,37,41)(H,36,38,40)/t25-/m1/s1
Standard InChI Key: DFOIZWNBHGWGAU-RUZDIDTESA-N
Molfile:
RDKit 2D
42 46 0 0 0 0 0 0 0 0999 V2000
34.8283 -4.1891 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
34.8271 -5.0086 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
35.5352 -5.4176 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
35.5334 -3.7802 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
36.2430 -5.0040 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
36.2420 -4.1855 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
36.8840 -3.6686 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
36.8893 -5.5155 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
37.6859 -3.8446 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
37.6915 -5.3284 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
38.0431 -4.5840 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
36.7109 -6.3130 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
38.1924 -3.2032 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
38.8603 -4.5804 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
39.2658 -3.8710 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
38.2049 -5.9642 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
39.0188 -5.9638 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
40.0804 -3.8696 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
40.4858 -3.1609 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
40.0741 -2.4540 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
39.2527 -2.4602 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
38.8509 -3.1694 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
39.4242 -6.6709 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
40.2374 -6.6709 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
40.6449 -5.9653 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
40.2333 -5.2583 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
39.4215 -5.2617 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
41.4621 -5.9639 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
41.8695 -5.2555 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
41.8719 -6.6709 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
34.1205 -3.7807 0.0000 Cl 0 0 0 0 0 0 0 0 0 0 0 0
42.6891 -6.6695 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
43.0940 -7.3759 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
43.9104 -7.3749 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
44.3186 -6.6659 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
43.9044 -5.9566 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
43.0894 -5.9611 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
40.6459 -7.3786 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
45.1358 -6.6634 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
45.5466 -7.3699 0.0000 F 0 0 0 0 0 0 0 0 0 0 0 0
45.5423 -5.9545 0.0000 F 0 0 0 0 0 0 0 0 0 0 0 0
45.9526 -6.6613 0.0000 F 0 0 0 0 0 0 0 0 0 0 0 0
1 2 2 0
2 3 1 0
3 5 2 0
6 4 2 0
4 1 1 0
5 6 1 0
6 7 1 0
5 8 1 0
7 9 1 0
8 10 1 0
9 11 1 0
10 11 1 0
8 12 2 0
9 13 2 0
11 14 1 1
14 15 1 0
10 16 1 0
16 17 1 0
15 18 2 0
18 19 1 0
19 20 2 0
20 21 1 0
21 22 2 0
22 15 1 0
17 23 2 0
23 24 1 0
24 25 2 0
25 26 1 0
26 27 2 0
27 17 1 0
25 28 1 0
28 29 2 0
28 30 1 0
1 31 1 0
30 32 1 0
32 33 2 0
33 34 1 0
34 35 2 0
35 36 1 0
36 37 2 0
37 32 1 0
24 38 1 0
35 39 1 0
39 40 1 0
39 41 1 0
39 42 1 0
M END Associated Targets(non-human) Molecule Features Natural Product: NoOral: NoChemical Probe: NoParenteral: NoMolecule Type: UnknownTopical: NoFirst In Class: NoBlack Box: NoChirality: NoAvailability: NoProdrug: No
Drug Indications MESH ID MESH Heading EFO IDs EFO Terms Max Phase for Indication References
Mechanisms of Action Mechanism of Action Action Type target ID Target Name Target Type Target Organism Binding Site Name References
Calculated Properties Molecular Weight: 593.99Molecular Weight (Monoisotopic): 593.1442AlogP: 5.92#Rotatable Bonds: 6Polar Surface Area: 104.29Molecular Species: NEUTRALHBA: 5HBD: 2#RO5 Violations: 2HBA (Lipinski): 8HBD (Lipinski): 2#RO5 Violations (Lipinski): 2CX Acidic pKa: 12.25CX Basic pKa: 4.52CX LogP: 6.09CX LogD: 6.09Aromatic Rings: 4Heavy Atoms: 42QED Weighted: 0.29Np Likeness Score: -1.56
References 1. Letourneau JJ, Stroke IL, Hilbert DW, Cole AG, Sturzenbecker LJ, Marinelli BA, Quintero JG, Sabalski J, Li Y, Ma L, Pechik I, Stein PD, Webb ML.. (2018) Synthesis and SAR studies of novel benzodiazepinedione-based inhibitors of Clostridium difficile (C. difficile) toxin B (TcdB)., 28 (23-24): [PMID:30392779 ] [10.1016/j.bmcl.2018.10.047 ]