HERBARUMIN II

ID: ALA446877

Max Phase: Preclinical

Molecular Formula: C12H20O5

Molecular Weight: 244.29

Molecule Type: Small molecule

Associated Items:

Representations

Synonyms (1): herbarumin II
Synonyms from Alternative Forms(1):

    Canonical SMILES:  CCC[C@H]1OC(=O)[C@H](O)CC/C=C/[C@H](O)[C@@H]1O

    Standard InChI:  InChI=1S/C12H20O5/c1-2-5-10-11(15)8(13)6-3-4-7-9(14)12(16)17-10/h3,6,8-11,13-15H,2,4-5,7H2,1H3/b6-3+/t8-,9+,10+,11-/m0/s1

    Standard InChI Key:  KQJGPGHQDDZVHJ-ZFOCBLLKSA-N

    Associated Targets(non-human)

    Calmodulin 71 Activities

    Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

    Sonchus arvensis 14 Activities

    Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

    Cirsium arvense 30 Activities

    Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

    Chenopodium album 769 Activities

    Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

    Vicia faba 57 Activities

    Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

    Cicer arietinum 49 Activities

    Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

    Pisum fulvum 4 Activities

    Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

    Phaseolus vulgaris 518 Activities

    Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

    Lathyrus sativus 4 Activities

    Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

    Lens culinaris 4 Activities

    Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

    Pisum sativum 62 Activities

    Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

    Medicago truncatula 4 Activities

    Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

    Lupinus albus 4 Activities

    Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

    Molecule Features

    Natural Product: NoOral: NoChemical Probe: NoParenteral: No
    Molecule Type: Small moleculeTopical: NoFirst In Class: NoBlack Box: No
    Chirality: NoAvailability: NoProdrug: No

    Drug Indications

    MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

    Mechanisms of Action

    Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

    Properties

    Molecular Weight: 244.29Molecular Weight (Monoisotopic): 244.1311AlogP: 0.13#Rotatable Bonds: 2
    Polar Surface Area: 86.99Molecular Species: NEUTRALHBA: 5HBD: 3
    #RO5 Violations: 0HBA (Lipinski): 5HBD (Lipinski): 3#RO5 Violations (Lipinski): 0
    CX Acidic pKa: 12.54CX Basic pKa: CX LogP: 0.53CX LogD: 0.53
    Aromatic Rings: 0Heavy Atoms: 17QED Weighted: 0.47Np Likeness Score: 2.45

    References

    1. Rivero-Cruz JF, Macías M, Cerda-García-Rojas CM, Mata R..  (2003)  A new phytotoxic nonenolide from Phoma herbarum.,  66  (4): [PMID:12713403] [10.1021/np020501t]
    2. Cimmino A, Andolfi A, Fondevilla S, Abouzeid MA, Rubiales D, Evidente A..  (2012)  Pinolide, a new nonenolide produced by Didymella pinodes , the causal agent of ascochyta blight on Pisum sativum.,  60  (21): [PMID:22568524] [10.1021/jf300824d]

    Source