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(R)-8-chloro-4-(4-picolinoylbenzyl)-3-(pyridin-2-ylmethyl)-3,4-dihydro-1H-benzo[e][1,4]diazepine-2,5-dione ID: ALA4545776
PubChem CID: 132213878
Max Phase: Preclinical
Molecular Formula: C28H21ClN4O3
Molecular Weight: 496.95
Molecule Type: Unknown
This compound is available for customization.
Associated Items:
Names and Identifiers Canonical SMILES: O=C(c1ccc(CN2C(=O)c3ccc(Cl)cc3NC(=O)[C@H]2Cc2ccccn2)cc1)c1ccccn1
Standard InChI: InChI=1S/C28H21ClN4O3/c29-20-11-12-22-24(15-20)32-27(35)25(16-21-5-1-3-13-30-21)33(28(22)36)17-18-7-9-19(10-8-18)26(34)23-6-2-4-14-31-23/h1-15,25H,16-17H2,(H,32,35)/t25-/m1/s1
Standard InChI Key: HYHYWUYQRFEFBF-RUZDIDTESA-N
Molfile:
RDKit 2D
36 40 0 0 0 0 0 0 0 0999 V2000
2.1612 -3.6608 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
2.1601 -4.4804 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
2.8681 -4.8893 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
2.8664 -3.2520 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
3.5760 -4.4757 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
3.5750 -3.6572 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
4.2170 -3.1403 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
4.2223 -4.9872 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
5.0189 -3.3163 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
5.0245 -4.8001 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
5.3761 -4.0557 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
4.0438 -5.7847 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
5.5254 -2.6749 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
6.1933 -4.0521 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
6.5988 -3.3427 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
5.5379 -5.4359 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
6.3518 -5.4356 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
7.4133 -3.3413 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
7.8188 -2.6326 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
7.4071 -1.9257 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
6.5857 -1.9319 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
6.1839 -2.6411 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
6.7572 -6.1426 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
7.5704 -6.1426 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
7.9779 -5.4370 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
7.5663 -4.7300 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
6.7544 -4.7334 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
8.7951 -5.4356 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
9.2024 -4.7272 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
1.4534 -3.2524 0.0000 Cl 0 0 0 0 0 0 0 0 0 0 0 0
9.2033 -6.1402 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
8.7942 -6.8489 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
9.2034 -7.5554 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
10.0214 -7.5544 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
10.4286 -6.8411 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
10.0172 -6.1375 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
1 2 2 0
2 3 1 0
3 5 2 0
6 4 2 0
4 1 1 0
5 6 1 0
6 7 1 0
5 8 1 0
7 9 1 0
8 10 1 0
9 11 1 0
10 11 1 0
8 12 2 0
9 13 2 0
11 14 1 1
14 15 1 0
10 16 1 0
16 17 1 0
15 18 2 0
18 19 1 0
19 20 2 0
20 21 1 0
21 22 2 0
22 15 1 0
17 23 2 0
23 24 1 0
24 25 2 0
25 26 1 0
26 27 2 0
27 17 1 0
25 28 1 0
28 29 2 0
1 30 1 0
31 32 2 0
32 33 1 0
33 34 2 0
34 35 1 0
35 36 2 0
36 31 1 0
28 31 1 0
M END Associated Targets(non-human) Molecule Features Natural Product: NoOral: NoChemical Probe: NoParenteral: NoMolecule Type: UnknownTopical: NoFirst In Class: NoBlack Box: NoChirality: NoAvailability: NoProdrug: No
Drug Indications MESH ID MESH Heading EFO IDs EFO Terms Max Phase for Indication References
Mechanisms of Action Mechanism of Action Action Type target ID Target Name Target Type Target Organism Binding Site Name References
Calculated Properties Molecular Weight: 496.95Molecular Weight (Monoisotopic): 496.1302AlogP: 4.57#Rotatable Bonds: 6Polar Surface Area: 92.26Molecular Species: NEUTRALHBA: 5HBD: 1#RO5 Violations: ┄HBA (Lipinski): 7HBD (Lipinski): 1#RO5 Violations (Lipinski): ┄CX Acidic pKa: 12.25CX Basic pKa: 4.53CX LogP: 4.85CX LogD: 4.85Aromatic Rings: 4Heavy Atoms: 36QED Weighted: 0.39Np Likeness Score: -0.93
References 1. Letourneau JJ, Stroke IL, Hilbert DW, Cole AG, Sturzenbecker LJ, Marinelli BA, Quintero JG, Sabalski J, Li Y, Ma L, Pechik I, Stein PD, Webb ML.. (2018) Synthesis and SAR studies of novel benzodiazepinedione-based inhibitors of Clostridium difficile (C. difficile) toxin B (TcdB)., 28 (23-24): [PMID:30392779 ] [10.1016/j.bmcl.2018.10.047 ]