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(R)-4-((8-chloro-2,5-dioxo-3-(pyridin-2-ylmethyl)-2,3-dihydro-1H-benzo[e][1,4]diazepin-4(5H)-yl)methyl)-2-methoxy-N-(5-(trifluoromethyl)pyridin-2-yl)benzamide ID: ALA4589634
PubChem CID: 132214357
Max Phase: Preclinical
Molecular Formula: C30H23ClF3N5O4
Molecular Weight: 609.99
Molecule Type: Unknown
This compound is available for customization.
Associated Items:
Names and Identifiers Canonical SMILES: COc1cc(CN2C(=O)c3ccc(Cl)cc3NC(=O)[C@H]2Cc2ccccn2)ccc1C(=O)Nc1ccc(C(F)(F)F)cn1
Standard InChI: InChI=1S/C30H23ClF3N5O4/c1-43-25-12-17(5-8-22(25)27(40)38-26-10-6-18(15-36-26)30(32,33)34)16-39-24(14-20-4-2-3-11-35-20)28(41)37-23-13-19(31)7-9-21(23)29(39)42/h2-13,15,24H,14,16H2,1H3,(H,37,41)(H,36,38,40)/t24-/m1/s1
Standard InChI Key: QWIAZRUSQPISGW-XMMPIXPASA-N
Molfile:
RDKit 2D
43 47 0 0 0 0 0 0 0 0999 V2000
33.1691 -17.9740 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
33.1680 -18.7936 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
33.8760 -19.2025 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
33.8742 -17.5652 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
34.5839 -18.7890 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
34.5829 -17.9704 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
35.2248 -17.4536 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
35.2302 -19.3005 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
36.0268 -17.6295 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
36.0323 -19.1133 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
36.3840 -18.3689 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
35.0517 -20.0979 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
36.5332 -16.9881 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
37.2012 -18.3654 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
37.6067 -17.6559 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
36.5457 -19.7491 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
37.3597 -19.7488 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
38.4212 -17.6545 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
38.8267 -16.9459 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
38.4149 -16.2389 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
37.5935 -16.2451 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
37.1918 -16.9543 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
37.7651 -20.4558 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
38.5782 -20.4558 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
38.9857 -19.7503 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
38.5741 -19.0432 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
37.7623 -19.0467 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
39.8029 -19.7489 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
40.2103 -19.0405 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
40.2127 -20.4559 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
32.4613 -17.5656 0.0000 Cl 0 0 0 0 0 0 0 0 0 0 0 0
41.0299 -20.4545 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
41.4349 -21.1609 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
42.2513 -21.1598 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
42.6595 -20.4509 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
42.2453 -19.7415 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
41.4302 -19.7461 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
38.9868 -21.1636 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
38.5781 -21.8713 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
43.4767 -20.4484 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
43.8874 -21.1548 0.0000 F 0 0 0 0 0 0 0 0 0 0 0 0
43.8831 -19.7394 0.0000 F 0 0 0 0 0 0 0 0 0 0 0 0
44.2934 -20.4463 0.0000 F 0 0 0 0 0 0 0 0 0 0 0 0
1 2 2 0
2 3 1 0
3 5 2 0
6 4 2 0
4 1 1 0
5 6 1 0
6 7 1 0
5 8 1 0
7 9 1 0
8 10 1 0
9 11 1 0
10 11 1 0
8 12 2 0
9 13 2 0
11 14 1 1
14 15 1 0
10 16 1 0
16 17 1 0
15 18 2 0
18 19 1 0
19 20 2 0
20 21 1 0
21 22 2 0
22 15 1 0
17 23 2 0
23 24 1 0
24 25 2 0
25 26 1 0
26 27 2 0
27 17 1 0
25 28 1 0
28 29 2 0
28 30 1 0
1 31 1 0
30 32 1 0
32 33 2 0
33 34 1 0
34 35 2 0
35 36 1 0
36 37 2 0
37 32 1 0
24 38 1 0
38 39 1 0
35 40 1 0
40 41 1 0
40 42 1 0
40 43 1 0
M END Associated Targets(non-human) Molecule Features Natural Product: NoOral: NoChemical Probe: NoParenteral: NoMolecule Type: UnknownTopical: NoFirst In Class: NoBlack Box: NoChirality: NoAvailability: NoProdrug: No
Drug Indications MESH ID MESH Heading EFO IDs EFO Terms Max Phase for Indication References
Mechanisms of Action Mechanism of Action Action Type target ID Target Name Target Type Target Organism Binding Site Name References
Calculated Properties Molecular Weight: 609.99Molecular Weight (Monoisotopic): 609.1391AlogP: 5.62#Rotatable Bonds: 7Polar Surface Area: 113.52Molecular Species: NEUTRALHBA: 6HBD: 2#RO5 Violations: 2HBA (Lipinski): 9HBD (Lipinski): 2#RO5 Violations (Lipinski): 2CX Acidic pKa: 12.24CX Basic pKa: 4.52CX LogP: 5.41CX LogD: 5.41Aromatic Rings: 4Heavy Atoms: 43QED Weighted: 0.28Np Likeness Score: -1.43
References 1. Letourneau JJ, Stroke IL, Hilbert DW, Cole AG, Sturzenbecker LJ, Marinelli BA, Quintero JG, Sabalski J, Li Y, Ma L, Pechik I, Stein PD, Webb ML.. (2018) Synthesis and SAR studies of novel benzodiazepinedione-based inhibitors of Clostridium difficile (C. difficile) toxin B (TcdB)., 28 (23-24): [PMID:30392779 ] [10.1016/j.bmcl.2018.10.047 ]