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Herbimycin G ID: ALA4636777
PubChem CID: 156011764
Max Phase: Preclinical
Molecular Formula: C29H42N2O9
Molecular Weight: 562.66
Molecule Type: Unknown
This compound is available for customization.
Associated Items:
Names and Identifiers Canonical SMILES: COc1c(O)cc2c3c1C[C@@H](C)C[C@H](OC)[C@H](O3)[C@@H](C)/C=C(\C)[C@H](OC(N)=O)[C@@H](OC)C[C@@H](O)/C=C(\C)C(=O)N2
Standard InChI: InChI=1S/C29H42N2O9/c1-14-8-19-26-20(13-21(33)27(19)38-7)31-28(34)17(4)11-18(32)12-23(37-6)25(40-29(30)35)16(3)10-15(2)24(39-26)22(9-14)36-5/h10-11,13-15,18,22-25,32-33H,8-9,12H2,1-7H3,(H2,30,35)(H,31,34)/b16-10+,17-11+/t14-,15+,18+,22+,23+,24-,25+/m1/s1
Standard InChI Key: VFUDTWBANAOTEF-YRTOUZEESA-N
Molfile:
RDKit 2D
41 43 0 0 0 0 0 0 0 0999 V2000
5.5864 -2.4950 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
5.5853 -3.3206 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
6.3023 -3.7367 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
7.0168 -3.3200 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
7.0139 -2.4912 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
6.3005 -2.0832 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
7.7300 -3.7347 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
4.8767 -3.7358 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
4.8761 -4.5588 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
5.5839 -4.9709 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
5.5832 -5.7939 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
6.2996 -6.2104 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
6.2990 -7.0334 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
8.4461 -3.3177 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
9.1592 -3.7324 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
8.4447 -2.4947 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
9.1605 -4.5553 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
9.8710 -3.3153 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
9.8737 -4.9657 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
9.8751 -5.7888 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
7.0111 -7.4455 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
7.7354 -7.0311 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
7.7364 -6.2081 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
4.8747 -6.2092 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
9.1052 -6.2853 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
8.8323 -7.1084 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
5.5725 -7.4475 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
6.6579 -4.7173 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
4.1501 -5.7832 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
4.1496 -4.9729 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
6.2990 -1.2472 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
4.8660 -2.0736 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
4.1398 -2.4926 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
9.2442 -7.8385 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
10.0801 -7.8482 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
10.5043 -7.1276 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
10.4876 -8.5741 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
10.6118 -4.5408 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
8.4272 -5.7601 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
8.5430 -4.9103 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
7.0965 -5.9968 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0
1 2 2 0
2 3 1 0
3 4 2 0
4 5 1 0
5 6 2 0
6 1 1 0
4 7 1 0
2 8 1 0
8 9 1 0
9 10 1 0
10 11 1 0
11 12 1 0
12 13 1 0
7 14 1 0
14 15 1 0
14 16 2 0
15 17 2 0
15 18 1 0
17 19 1 0
19 20 1 0
13 21 1 0
21 22 2 0
22 23 1 0
11 24 1 1
20 25 1 0
25 26 1 0
22 26 1 0
13 27 1 6
3 28 1 0
12 28 1 0
24 29 1 0
9 30 1 6
6 31 1 0
1 32 1 0
32 33 1 0
26 34 1 1
34 35 1 0
35 36 2 0
35 37 1 0
19 38 1 6
25 39 1 1
39 40 1 0
12 41 1 1
M END Associated Targets(Human) Associated Targets(non-human) Molecule Features Natural Product: NoOral: NoChemical Probe: NoParenteral: NoMolecule Type: UnknownTopical: NoFirst In Class: NoBlack Box: NoChirality: NoAvailability: NoProdrug: No
Drug Indications MESH ID MESH Heading EFO IDs EFO Terms Max Phase for Indication References
Mechanisms of Action Mechanism of Action Action Type target ID Target Name Target Type Target Organism Binding Site Name References
Calculated Properties Molecular Weight: 562.66Molecular Weight (Monoisotopic): 562.2890AlogP: 3.46#Rotatable Bonds: 4Polar Surface Area: 158.80Molecular Species: NEUTRALHBA: 9HBD: 4#RO5 Violations: 1HBA (Lipinski): 11HBD (Lipinski): 5#RO5 Violations (Lipinski): 2CX Acidic pKa: 10.21CX Basic pKa: ┄CX LogP: 3.00CX LogD: 3.00Aromatic Rings: 1Heavy Atoms: 40QED Weighted: 0.40Np Likeness Score: 2.09
References 1. Nong XH, Tu ZC, Qi SH.. (2020) Ansamycin derivatives from the marine-derived Streptomyces sp. SCSGAA 0027 and their cytotoxic and antiviral activities., 30 (11): [PMID:32273216 ] [10.1016/j.bmcl.2020.127168 ]