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3-methoxy-4-[[11-methyl-6-oxo-5-(2,2,2-trifluoroethyl)pyrimido[4,5-b][1,4]benzodiazepin-2-yl]amino]-N-(1-methyl-4-piperidyl)benzamide ID: ALA4640016
PubChem CID: 134457906
Max Phase: Preclinical
Molecular Formula: C28H30F3N7O3
Molecular Weight: 569.59
Molecule Type: Unknown
Associated Items:
Names and Identifiers Canonical SMILES: COc1cc(C(=O)NC2CCN(C)CC2)ccc1Nc1ncc2c(n1)N(C)c1ccccc1C(=O)N2CC(F)(F)F
Standard InChI: InChI=1S/C28H30F3N7O3/c1-36-12-10-18(11-13-36)33-25(39)17-8-9-20(23(14-17)41-3)34-27-32-15-22-24(35-27)37(2)21-7-5-4-6-19(21)26(40)38(22)16-28(29,30)31/h4-9,14-15,18H,10-13,16H2,1-3H3,(H,33,39)(H,32,34,35)
Standard InChI Key: WVDQWAPBMCRMGM-UHFFFAOYSA-N
Molfile:
RDKit 2D
41 45 0 0 0 0 0 0 0 0999 V2000
3.1890 -2.9099 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
3.7914 -3.4778 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
4.5338 -3.1290 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
4.5338 -2.3045 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
5.2758 -3.4978 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
5.8601 -2.9170 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
5.6464 -2.1181 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
6.2307 -1.5379 0.0000 F 0 0 0 0 0 0 0 0 0 0 0 0
4.8484 -1.9076 0.0000 F 0 0 0 0 0 0 0 0 0 0 0 0
5.4327 -1.3192 0.0000 F 0 0 0 0 0 0 0 0 0 0 0 0
5.4555 -4.3003 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
6.2594 -4.4372 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
6.5427 -5.2047 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
6.0278 -5.8324 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
6.2415 -6.6262 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
7.0353 -6.8441 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
7.2503 -7.6428 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
8.0494 -7.8498 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
8.6279 -7.2680 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
9.4260 -7.4817 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
9.6397 -8.2797 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
10.4376 -8.4934 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
11.0178 -7.9091 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
11.8158 -8.1228 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
12.0295 -8.9209 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
11.4452 -9.5051 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
10.6472 -9.2914 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
12.8275 -9.1346 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
10.0061 -6.9016 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
8.4142 -6.4739 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
7.6199 -6.2599 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
7.4062 -5.4620 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
7.9905 -4.8777 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
5.2197 -5.6987 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
4.9347 -4.9310 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
4.1094 -4.9310 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
3.6944 -5.6444 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
3.5995 -4.2802 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
2.8083 -4.5142 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
2.2094 -3.9436 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
2.4015 -3.1464 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
2 1 1 0
2 3 1 0
3 4 2 0
3 5 1 0
5 6 1 0
6 7 1 0
7 8 1 0
7 9 1 0
7 10 1 0
5 11 1 0
11 12 1 0
13 12 2 0
14 13 1 0
14 15 1 0
15 16 1 0
16 17 1 0
17 18 2 0
18 19 1 0
19 20 1 0
20 21 1 0
21 22 1 0
23 22 1 0
24 23 1 0
25 24 1 0
26 25 1 0
27 26 1 0
22 27 1 0
25 28 1 0
20 29 2 0
19 30 2 0
30 31 1 0
31 16 2 0
31 32 1 0
32 33 1 0
34 14 2 0
35 34 1 0
11 35 2 0
36 35 1 0
36 37 1 0
38 36 1 0
2 38 2 0
38 39 1 0
40 39 2 0
41 40 1 0
1 41 2 0
M END Associated Targets(Human) Molecule Features Natural Product: NoOral: NoChemical Probe: NoParenteral: NoMolecule Type: UnknownTopical: NoFirst In Class: NoBlack Box: NoChirality: NoAvailability: NoProdrug: No
Drug Indications MESH ID MESH Heading EFO IDs EFO Terms Max Phase for Indication References
Mechanisms of Action Mechanism of Action Action Type target ID Target Name Target Type Target Organism Binding Site Name References
Calculated Properties Molecular Weight: 569.59Molecular Weight (Monoisotopic): 569.2362AlogP: 4.34#Rotatable Bonds: 6Polar Surface Area: 102.93Molecular Species: BASEHBA: 8HBD: 2#RO5 Violations: 1HBA (Lipinski): 10HBD (Lipinski): 2#RO5 Violations (Lipinski): 1CX Acidic pKa: 12.15CX Basic pKa: 8.57CX LogP: 3.31CX LogD: 2.12Aromatic Rings: 3Heavy Atoms: 41QED Weighted: 0.45Np Likeness Score: -1.30
References 1. Ferguson FM, Liu Y, Harshbarger W, Huang L, Wang J, Deng X, Capuzzi SJ, Muratov EN, Tropsha A, Muthuswamy S, Westover KD, Gray NS.. (2020) Synthesis and Structure-Activity Relationships of DCLK1 Kinase Inhibitors Based on a 5,11-Dihydro-6H -benzo[e ]pyrimido[5,4-b ][1,4]diazepin-6-one Scaffold., 63 (14): [PMID:32530623 ] [10.1021/acs.jmedchem.0c00596 ]