4-((7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino)-N-(4-((4-(6-(2-((2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindolin-4-yl)oxy)acetamido)hexanoyl)piperazin-1-yl)methyl)phenyl)-1H-pyrazole-3-carboxamide

ID: ALA4642658

PubChem CID: 156016748

Max Phase: Preclinical

Molecular Formula: C42H44N12O8

Molecular Weight: 844.89

Molecule Type: Unknown

This compound is available for customization.

Associated Items:

Names and Identifiers

Canonical SMILES:  O=C(COc1cccc2c1C(=O)N(C1CCC(=O)NC1=O)C2=O)NCCCCCC(=O)N1CCN(Cc2ccc(NC(=O)c3n[nH]cc3Nc3ncnc4[nH]ccc34)cc2)CC1

Standard InChI:  InChI=1S/C42H44N12O8/c55-32-13-12-30(39(58)50-32)54-41(60)27-5-4-6-31(35(27)42(54)61)62-23-33(56)43-15-3-1-2-7-34(57)53-19-17-52(18-20-53)22-25-8-10-26(11-9-25)48-40(59)36-29(21-47-51-36)49-38-28-14-16-44-37(28)45-24-46-38/h4-6,8-11,14,16,21,24,30H,1-3,7,12-13,15,17-20,22-23H2,(H,43,56)(H,47,51)(H,48,59)(H,50,55,58)(H2,44,45,46,49)

Standard InChI Key:  DREFRNAJSLXOLV-UHFFFAOYSA-N

Molfile:  

 
     RDKit          2D

 62 69  0  0  0  0  0  0  0  0999 V2000
   14.6787  -12.3818    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   15.3863  -12.7977    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.1023  -12.3965    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.3778  -13.6190    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   16.8099  -12.8124    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   16.8014  -13.6336    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.0831  -14.0363    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.0743  -14.8568    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.7824  -15.2735    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.5061  -14.0487    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.4970  -14.8649    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.2707  -15.1245    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.7554  -14.4687    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   18.2854  -13.8023    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.5466  -13.0239    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   18.5144  -15.9086    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   19.5767  -14.4779    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.9786  -15.1987    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.7962  -15.2098    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.2165  -14.5044    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.8171  -13.7862    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   19.9933  -13.7735    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.5892  -13.0567    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   22.0378  -14.5166    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.3021  -20.5702    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9175  -20.0264    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.7551  -19.2251    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5283  -20.3105    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    3.3628  -19.5112    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9803  -18.9654    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6466  -18.2092    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8253  -18.2903    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.6501  -19.0965    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.3718  -18.6801    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.1465  -18.9443    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3979  -19.7229    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2191  -19.7308    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    7.4792  -18.9519    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.8186  -18.4612    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8251  -17.6399    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5401  -17.2328    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.1165  -17.2216    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.5466  -16.4115    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2618  -16.0141    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2686  -15.1936    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5595  -14.7745    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8421  -15.1860    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.8388  -16.0052    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.5649  -13.9532    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2794  -13.5492    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    8.9874  -13.9666    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.6998  -13.5662    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.7094  -12.7445    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    9.0004  -12.3250    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.2819  -12.7312    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.4254  -12.3392    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.1330  -12.7592    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.4339  -11.5179    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.8449  -12.3580    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.5525  -12.7739    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.2633  -12.3708    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.9678  -12.7849    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  2  4  2  0
  3  5  1  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  2  0
  9 11  1  0
 10  6  1  0
 10 11  2  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 10  1  0
 14 15  2  0
 12 16  2  0
 13 17  1  0
 17 18  1  0
 17 22  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  2  0
 20 24  2  0
 25 26  2  0
 26 27  1  0
 27 30  2  0
 29 28  2  0
 28 25  1  0
 29 30  1  0
 30 31  1  0
 31 32  2  0
 32 33  1  0
 33 29  1  0
 27 34  1  0
 34 35  1  0
 35 36  2  0
 36 37  1  0
 37 38  1  0
 38 39  2  0
 39 35  1  0
 39 40  1  0
 40 41  1  0
 40 42  2  0
 41 43  1  0
 43 44  2  0
 44 45  1  0
 45 46  2  0
 46 47  1  0
 47 48  2  0
 48 43  1  0
 46 49  1  0
 49 50  1  0
 50 51  1  0
 50 55  1  0
 51 52  1  0
 52 53  1  0
 53 54  1  0
 54 55  1  0
 53 56  1  0
 56 57  1  0
 56 58  2  0
 57 59  1  0
 59 60  1  0
 60 61  1  0
 61 62  1  0
 62  1  1  0
M  END

Alternative Forms

  1. Parent:

    ALA4642658

    ---

Associated Targets(Human)

PC-3 (62116 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
CDK9 Tchem Protein cereblon/CDK9 (113 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
CDK2 Tchem Protein cereblon/Cyclin-dependent kinase 2 (25 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: UnknownTopical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Biocomponents

Calculated Properties

Molecular Weight: 844.89Molecular Weight (Monoisotopic): 844.3405AlogP: 2.48#Rotatable Bonds: 16
Polar Surface Area: 256.81Molecular Species: NEUTRALHBA: 13HBD: 6
#RO5 Violations: 3HBA (Lipinski): 20HBD (Lipinski): 6#RO5 Violations (Lipinski): 3
CX Acidic pKa: 11.57CX Basic pKa: 6.71CX LogP: 2.52CX LogD: 2.44
Aromatic Rings: 5Heavy Atoms: 62QED Weighted: 0.06Np Likeness Score: -1.21

References

1. Zhou F, Chen L, Cao C, Yu J, Luo X, Zhou P, Zhao L, Du W, Cheng J, Xie Y, Chen Y..  (2020)  Development of selective mono or dual PROTAC degrader probe of CDK isoforms.,  187  [PMID:31846828] [10.1016/j.ejmech.2019.111952]

Source