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11-benzyl-2-[2-methoxy-4-(4-methylpiperazin-1-yl)anilino]-5-methyl-pyrimido[4,5-b][1,4]benzodiazepin-6-one ID: ALA4645267
PubChem CID: 46843837
Max Phase: Preclinical
Molecular Formula: C31H33N7O2
Molecular Weight: 535.65
Molecule Type: Unknown
Associated Items:
Names and Identifiers Canonical SMILES: COc1cc(N2CCN(C)CC2)ccc1Nc1ncc2c(n1)N(Cc1ccccc1)c1ccccc1C(=O)N2C
Standard InChI: InChI=1S/C31H33N7O2/c1-35-15-17-37(18-16-35)23-13-14-25(28(19-23)40-3)33-31-32-20-27-29(34-31)38(21-22-9-5-4-6-10-22)26-12-8-7-11-24(26)30(39)36(27)2/h4-14,19-20H,15-18,21H2,1-3H3,(H,32,33,34)
Standard InChI Key: JVSJTGAAAMSIAW-UHFFFAOYSA-N
Molfile:
RDKit 2D
40 45 0 0 0 0 0 0 0 0999 V2000
3.3600 -3.6838 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
3.9623 -4.2534 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
4.7046 -3.9047 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
4.7046 -3.0832 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
5.4466 -4.2734 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
6.0267 -3.6892 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
5.6221 -5.0759 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
6.4260 -5.2127 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
6.7134 -5.9801 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
6.1943 -6.6078 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
6.4080 -7.4058 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
7.2059 -7.6195 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
7.4209 -8.4181 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
8.2200 -8.6250 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
8.7985 -8.0433 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
9.5963 -8.2570 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
9.8059 -9.0549 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
10.6037 -9.2686 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
11.1880 -8.6844 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
11.9859 -8.8980 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
10.9743 -7.8906 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
10.1764 -7.6769 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
8.5847 -7.2492 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
7.7904 -7.0354 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
7.5768 -6.2375 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
8.1610 -5.6532 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
5.3904 -6.4783 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
5.1014 -5.7065 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
4.2761 -5.7065 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
3.8654 -6.4199 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
4.2761 -7.1332 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
5.1018 -7.1332 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
5.5140 -7.8486 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
5.0990 -8.5646 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
4.2791 -8.5646 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
3.8628 -7.8510 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
3.7704 -5.0558 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
2.9793 -5.2899 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
2.3805 -4.7234 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
2.5725 -3.9221 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
2 1 1 0
2 3 1 0
3 4 2 0
3 5 1 0
5 6 1 0
5 7 1 0
7 8 1 0
9 8 2 0
10 9 1 0
10 11 1 0
11 12 1 0
12 13 1 0
13 14 2 0
14 15 1 0
15 16 1 0
16 17 1 0
17 18 1 0
18 19 1 0
19 20 1 0
19 21 1 0
21 22 1 0
22 16 1 0
15 23 2 0
23 24 1 0
24 12 2 0
24 25 1 0
25 26 1 0
27 10 2 0
28 27 1 0
7 28 2 0
29 28 1 0
29 30 1 0
30 31 1 0
32 31 2 0
33 32 1 0
34 33 2 0
35 34 1 0
36 35 2 0
31 36 1 0
37 29 1 0
2 37 2 0
37 38 1 0
39 38 2 0
40 39 1 0
1 40 2 0
M END Associated Targets(Human) Molecule Features Natural Product: NoOral: NoChemical Probe: NoParenteral: NoMolecule Type: UnknownTopical: NoFirst In Class: NoBlack Box: NoChirality: NoAvailability: NoProdrug: No
Drug Indications MESH ID MESH Heading EFO IDs EFO Terms Max Phase for Indication References
Mechanisms of Action Mechanism of Action Action Type target ID Target Name Target Type Target Organism Binding Site Name References
Calculated Properties Molecular Weight: 535.65Molecular Weight (Monoisotopic): 535.2696AlogP: 4.91#Rotatable Bonds: 6Polar Surface Area: 77.07Molecular Species: NEUTRALHBA: 8HBD: 1#RO5 Violations: 1HBA (Lipinski): 9HBD (Lipinski): 1#RO5 Violations (Lipinski): 1CX Acidic pKa: ┄CX Basic pKa: 7.84CX LogP: 4.93CX LogD: 4.35Aromatic Rings: 4Heavy Atoms: 40QED Weighted: 0.37Np Likeness Score: -1.22
References 1. Ferguson FM, Liu Y, Harshbarger W, Huang L, Wang J, Deng X, Capuzzi SJ, Muratov EN, Tropsha A, Muthuswamy S, Westover KD, Gray NS.. (2020) Synthesis and Structure-Activity Relationships of DCLK1 Kinase Inhibitors Based on a 5,11-Dihydro-6H -benzo[e ]pyrimido[5,4-b ][1,4]diazepin-6-one Scaffold., 63 (14): [PMID:32530623 ] [10.1021/acs.jmedchem.0c00596 ]