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N-(2-(2-(6-methoxyquinolin-4-yl)ethyl)-trans-1,3-dioxan-5-yl)-4-(trifluoromethyl)benzamide ID: ALA4759488
PubChem CID: 162657885
Max Phase: Preclinical
Molecular Formula: C24H23F3N2O4
Molecular Weight: 460.45
Molecule Type: Unknown
Associated Items:
Names and Identifiers Canonical SMILES: COc1ccc2nccc(CC[C@H]3OC[C@H](NC(=O)c4ccc(C(F)(F)F)cc4)CO3)c2c1
Standard InChI: InChI=1S/C24H23F3N2O4/c1-31-19-7-8-21-20(12-19)15(10-11-28-21)4-9-22-32-13-18(14-33-22)29-23(30)16-2-5-17(6-3-16)24(25,26)27/h2-3,5-8,10-12,18,22H,4,9,13-14H2,1H3,(H,29,30)/t18-,22-
Standard InChI Key: PJZQINKXMBEZCJ-LBZQVFOQSA-N
Molfile:
RDKit 2D
33 36 0 0 0 0 0 0 0 0999 V2000
4.2797 -19.7308 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
4.9935 -19.3173 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
4.9906 -18.4905 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
4.2779 -18.0852 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
3.5675 -19.3177 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
3.5698 -18.4959 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
2.8597 -18.0868 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
2.1510 -18.4944 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
2.1527 -19.3194 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
2.8592 -19.7289 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
1.4391 -18.0859 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
4.2744 -17.2639 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
4.9845 -16.8482 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
5.6980 -17.2578 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
5.6969 -18.0780 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
6.4064 -18.4835 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
7.1189 -18.0754 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
7.1173 -17.2531 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
6.4033 -16.8390 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
7.8268 -18.4836 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
8.5384 -18.0747 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
9.2505 -18.4829 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
8.5380 -17.2534 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
1.4369 -17.2687 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
9.2488 -19.3036 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
9.9600 -19.7117 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
10.6706 -19.2992 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
10.6654 -18.4742 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
9.9537 -18.0697 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
11.3800 -19.7047 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
11.3836 -20.5219 0.0000 F 0 0 0 0 0 0 0 0 0 0 0 0
12.0860 -19.2930 0.0000 F 0 0 0 0 0 0 0 0 0 0 0 0
12.0845 -20.1120 0.0000 F 0 0 0 0 0 0 0 0 0 0 0 0
5 1 1 0
1 2 2 0
2 3 1 0
3 4 2 0
4 6 1 0
5 6 1 0
6 7 2 0
7 8 1 0
8 9 2 0
9 10 1 0
10 5 2 0
8 11 1 0
4 12 1 0
12 13 1 0
14 13 1 1
14 15 1 0
14 19 1 0
15 16 1 0
16 17 1 0
17 18 1 0
18 19 1 0
17 20 1 6
20 21 1 0
21 22 1 0
21 23 2 0
11 24 1 0
22 25 2 0
25 26 1 0
26 27 2 0
27 28 1 0
28 29 2 0
29 22 1 0
27 30 1 0
30 31 1 0
30 32 1 0
30 33 1 0
M END Associated Targets(Human) Associated Targets(non-human) Molecule Features Natural Product: NoOral: NoChemical Probe: NoParenteral: NoMolecule Type: UnknownTopical: NoFirst In Class: NoBlack Box: NoChirality: NoAvailability: NoProdrug: No
Drug Indications MESH ID MESH Heading EFO IDs EFO Terms Max Phase for Indication References
Mechanisms of Action Mechanism of Action Action Type target ID Target Name Target Type Target Organism Binding Site Name References
Calculated Properties Molecular Weight: 460.45Molecular Weight (Monoisotopic): 460.1610AlogP: 4.37#Rotatable Bonds: 6Polar Surface Area: 69.68Molecular Species: NEUTRALHBA: 5HBD: 1#RO5 Violations: ┄HBA (Lipinski): 6HBD (Lipinski): 1#RO5 Violations (Lipinski): ┄CX Acidic pKa: ┄CX Basic pKa: 5.22CX LogP: 4.27CX LogD: 4.27Aromatic Rings: 3Heavy Atoms: 33QED Weighted: 0.59Np Likeness Score: -0.65
References 1. Lu Y,Papa JL,Nolan S,English A,Seffernick JT,Shkolnikov N,Powell J,Lindert S,Wozniak DJ,Yalowich J,Mitton-Fry MJ. (2020) Dioxane-Linked Amide Derivatives as Novel Bacterial Topoisomerase Inhibitors against Gram-Positive Staphylococcus aureus., 11 (12): [PMID:33335666 ] [10.1021/acsmedchemlett.0c00428 ]