ID: ALA4765128

Max Phase: Preclinical

Molecular Formula: C32H40N6O3

Molecular Weight: 556.71

Molecule Type: Unknown

Associated Items:

Representations

Canonical SMILES:  CCC(=O)CCCCC[C@H](NC(=O)[C@H]1CC12CCN(C)CC2)c1[nH]c(-c2cc3ccccc3nc2OC)nc1C#N

Standard InChI:  InChI=1S/C32H40N6O3/c1-4-22(39)11-6-5-7-13-26(35-30(40)24-19-32(24)14-16-38(2)17-15-32)28-27(20-33)34-29(37-28)23-18-21-10-8-9-12-25(21)36-31(23)41-3/h8-10,12,18,24,26H,4-7,11,13-17,19H2,1-3H3,(H,34,37)(H,35,40)/t24-,26+/m1/s1

Standard InChI Key:  CGJSRVMMOVKPAO-RSXGOPAZSA-N

Associated Targets(Human)

Class 1 histone deacetylase 459 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Histone deacetylase 8 4516 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Histone deacetylase 6 20808 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Histone deacetylase 2 3971 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Histone deacetylase 3 3654 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Histone deacetylase 1 10854 Activities

Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: UnknownTopical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Properties

Molecular Weight: 556.71Molecular Weight (Monoisotopic): 556.3162AlogP: 5.32#Rotatable Bonds: 12
Polar Surface Area: 124.00Molecular Species: BASEHBA: 7HBD: 2
#RO5 Violations: 2HBA (Lipinski): 9HBD (Lipinski): 2#RO5 Violations (Lipinski): 2
CX Acidic pKa: 9.47CX Basic pKa: 8.74CX LogP: 4.25CX LogD: 3.14
Aromatic Rings: 3Heavy Atoms: 41QED Weighted: 0.29Np Likeness Score: -0.29

References

1. Clausen DJ,Liu J,Yu W,Duffy JL,Chung CC,Myers RW,Klein DJ,Fells J,Holloway K,Wu J,Wu G,Howell BJ,Barnard RJO,Kozlowski J.  (2020)  Development of a selective HDAC inhibitor aimed at reactivating the HIV latent reservoir.,  30  (17.0): [PMID:32738976] [10.1016/j.bmcl.2020.127367]

Source