2-methyl-N-(2-(methylsulfonyl)cyclopentyl)pyridin-3-amine

Names and Identifiers

Canonical SMILES: Cc1ncccc1NC1CCCC1S(C)(=O)=O

Standard InChI: InChI=1S/C12H18N2O2S/c1-9-10(6-4-8-13-9)14-11-5-3-7-12(11)17(2,15)16/h4,6,8,11-12,14H,3,5,7H2,1-2H3

Standard InChI Key: BFFKQDIRHHTNOE-UHFFFAOYSA-N

Molfile:

 
     RDKit          2D

 17 18  0  0  0  0  0  0  0  0999 V2000
    5.2086  -18.2960    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    5.7905  -17.7182    0.0000 S   0  0  0  0  0  0  0  0  0  0  0  0
    4.9991  -17.5031    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    4.9100  -20.7186    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9088  -21.5382    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.6169  -21.9472    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3265  -21.5377    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3237  -20.7151    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6151  -20.3098    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2022  -20.3102    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6127  -19.4926    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.3191  -19.0819    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0670  -19.4101    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6120  -18.8012    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2013  -18.0947    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4025  -18.2671    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.9612  -16.9222    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  2  0
  3  2  2  0
  4  5  2  0
  5  6  1  0
  6  7  2  0
  7  8  1  0
  8  9  2  0
  9  4  1  0
  4 10  1  0
  9 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 12  1  0
 16  2  1  0
  2 17  1  0
M  END

Alternative Forms

Parent:

ALA4791892
2-methyl-N-(2-methylsulfonylcyclopentyl)pyridin-3-amine

Associated Targets(Human)

BAZ2B Tchem Bromodomain adjacent to zinc finger domain protein 2B (56204 Activities)

Discover Target: BAZ2B

Activity Type	Relation	Activity value	Units	Action Type	Journal	PubMed Id	doi	Assay Aladdin ID

Associated Targets(non-human)

Plasmodium falciparum (966862 Activities)

Explore this target

Activity Type	Relation	Activity value	Units	Action Type	Journal	PubMed Id	doi	Assay Aladdin ID

Molecule Features

Natural Product: No	Oral: No	Chemical Probe: No	Parenteral: No
Molecule Type: Unknown	Topical: No	First In Class: No	Black Box: No
Chirality: No	Availability: No	Prodrug: No

Drug Indications

MESH ID	MESH Heading	EFO IDs	EFO Terms	Max Phase for Indication	References

Mechanisms of Action

Mechanism of Action	Action Type	target ID	Target Name	Target Type	Target Organism	Binding Site Name	References

Calculated Properties

Molecular Weight: 254.35	Molecular Weight (Monoisotopic): 254.1089	AlogP: 1.77	#Rotatable Bonds: 3
Polar Surface Area: 59.06	Molecular Species: NEUTRAL	HBA: 4	HBD: 1
#RO5 Violations: ┄	HBA (Lipinski): 4	HBD (Lipinski): 1	#RO5 Violations (Lipinski): ┄
CX Acidic pKa: ┄	CX Basic pKa: 6.28	CX LogP: 0.16	CX LogD: 0.13
Aromatic Rings: 1	Heavy Atoms: 17	QED Weighted: 0.89	Np Likeness Score: -0.72

References

1. Marchand JR,Lolli G,Caflisch A. (2016) Derivatives of 3-Amino-2-methylpyridine as BAZ2B Bromodomain Ligands: In Silico Discovery and in Crystallo Validation., 59 (21.0): [PMID:27731638] [10.1021/acs.jmedchem.6b01258]
2. Dechering K; Duffey M. (2022) Replenishing the malaria drug discovery pipeline: Screening and hit evaluation of the MMV Hit Generation Library 1 (HGL1) against asexual blood stage Plasmodium falciparum ,using a nano luciferase reporter read-out, [10.6019/CHEMBL4888484]

Source

Source(2):