4-(5-(2-(2,6-dioxopiperidin-3-yl)-1-oxoisoindolin-4-yl)pentyl)-N-(4-((5-((S)-1-hydroxybutan-2-ylamino)-3-isopropylpyrazolo[1,5-a]pyrimidin-7-ylamino)methyl)phenyl)piperazine-1-carboxamide

ID: ALA4849244

PubChem CID: 146396646

Max Phase: Preclinical

Molecular Formula: C43H56N10O5

Molecular Weight: 792.99

Molecule Type: Unknown

This compound is available for customization.

Associated Items:

Names and Identifiers

Canonical SMILES:  CC[C@@H](CO)Nc1cc(NCc2ccc(NC(=O)N3CCN(CCCCCc4cccc5c4CN(C4CCC(=O)NC4=O)C5=O)CC3)cc2)n2ncc(C(C)C)c2n1

Standard InChI:  InChI=1S/C43H56N10O5/c1-4-31(27-54)46-37-23-38(53-40(48-37)34(25-45-53)28(2)3)44-24-29-12-14-32(15-13-29)47-43(58)51-21-19-50(20-22-51)18-7-5-6-9-30-10-8-11-33-35(30)26-52(42(33)57)36-16-17-39(55)49-41(36)56/h8,10-15,23,25,28,31,36,44,54H,4-7,9,16-22,24,26-27H2,1-3H3,(H,46,48)(H,47,58)(H,49,55,56)/t31-,36?/m0/s1

Standard InChI Key:  YAEBZMQWNHWNAG-BRKUKBBPSA-N

Molfile:  

 
     RDKit          2D

 58 64  0  0  0  0  0  0  0  0999 V2000
    7.6985   -4.1445    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4782   -4.9371    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.6838   -5.1390    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.0215   -5.5513    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.8435   -6.3513    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5508   -6.7659    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    9.1651   -6.2226    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    8.8372   -5.4706    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1286   -6.7539    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    7.1211   -7.5752    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.4062   -7.9778    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.7030   -7.5591    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9881   -7.9618    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9806   -8.7830    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7105   -6.7420    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.0032   -6.3234    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.8284   -7.9897    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5433   -7.5871    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2465   -8.0058    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    9.9614   -7.5991    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.6687   -8.0177    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.3795   -7.6110    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.0868   -8.0296    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.0793   -8.8509    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.7866   -9.2654    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   13.4974   -8.8628    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.2047   -9.2815    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   14.9196   -8.8748    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.6269   -9.2934    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.6194  -10.1147    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   16.3268  -10.5292    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.0375  -10.1266    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.7448  -10.5411    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.4597  -10.1385    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.1629  -10.5572    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.1554  -11.3785    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.8627  -11.7930    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   19.8552  -12.6142    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.6329  -12.8759    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.1225  -12.2154    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   21.9396  -12.2229    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.3582  -11.5155    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   23.1754  -11.5231    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   23.5821  -12.2379    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   23.1635  -12.9453    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   22.3422  -12.9377    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.9277  -13.6410    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   24.3993  -12.2455    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   20.6435  -11.5453    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.8765  -13.6566    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   19.1403  -13.0169    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.4330  -12.5982    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   18.4405  -11.7811    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.9045  -10.5173    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.1972  -10.0986    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.5049   -8.0416    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.3644   -9.2535    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.6571   -8.8348    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  2  4  1  0
  4  5  2  0
  5  6  1  0
  6  7  1  0
  7  8  2  0
  4  8  1  0
  5  9  1  0
  9 10  2  0
 10 11  1  0
 12 11  1  1
 12 13  1  0
 13 14  1  0
 12 15  1  0
 15 16  1  0
 10 17  1  0
 17 18  2  0
  6 18  1  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  2  0
 22 23  1  0
 23 24  2  0
 24 25  1  0
 25 26  1  0
 26 27  1  0
 27 28  1  0
 28 29  1  0
 29 30  1  0
 30 31  1  0
 31 32  1  0
 32 33  1  0
 33 34  1  0
 34 35  1  0
 35 36  1  0
 36 37  2  0
 37 38  1  0
 38 39  1  0
 39 40  1  0
 40 41  1  0
 41 42  1  0
 42 43  1  0
 43 44  1  0
 44 45  1  0
 45 46  1  0
 41 46  1  0
 46 47  2  0
 44 48  2  0
 40 49  1  0
 37 49  1  0
 39 50  2  0
 38 51  2  0
 51 52  1  0
 52 53  2  0
 36 53  1  0
 30 54  1  0
 54 55  1  0
 27 55  1  0
 26 56  2  0
 24 57  1  0
 57 58  2  0
 21 58  1  0
M  END

Alternative Forms

  1. Parent:

    ALA4849244

    ---

Associated Targets(Human)

MDA-MB-468 (9477 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
BT-549 (31254 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
MDA-MB-231 (73002 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
CDK9 Tchem Protein cereblon/CDK9 (113 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
CDK1 Tchem Protein cereblon/Cyclin-dependent kinase 1 (7 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
CDK2 Tchem Protein cereblon/Cyclin-dependent kinase 2 (25 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
CDK4 Tclin Protein cereblon/Cyclin-dependent kinase 4 (68 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
CDK5 Tchem Protein cereblon/Cyclin-dependent-like kinase 5 (8 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
CDK6 Tclin Protein cereblon/Cyclin-dependent kinase 6 (113 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
CDK7 Tchem Protein cereblon/Cyclin-dependent kinase 7 (8 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
CRBN Tclin Cereblon/GSPT1 (159 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Tumour (13 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: UnknownTopical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Biocomponents

Calculated Properties

Molecular Weight: 792.99Molecular Weight (Monoisotopic): 792.4435AlogP: 4.97#Rotatable Bonds: 16
Polar Surface Area: 176.54Molecular Species: NEUTRALHBA: 11HBD: 5
#RO5 Violations: 2HBA (Lipinski): 15HBD (Lipinski): 5#RO5 Violations (Lipinski): 2
CX Acidic pKa: 11.60CX Basic pKa: 7.64CX LogP: 4.19CX LogD: 3.76
Aromatic Rings: 4Heavy Atoms: 58QED Weighted: 0.08Np Likeness Score: -0.76

References

1. Wei D, Wang H, Zeng Q, Wang W, Hao B, Feng X, Wang P, Song N, Kan W, Huang G, Zhou X, Tan M, Zhou Y, Huang R, Li J, Chen XH..  (2021)  Discovery of Potent and Selective CDK9 Degraders for Targeting Transcription Regulation in Triple-Negative Breast Cancer.,  64  (19.0): [PMID:34538051] [10.1021/acs.jmedchem.1c01350]

Source