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2-(4-(6-(6-acetyl-8-cyclopentyl-5-methyl-7-oxo-7,8-dihydropyrido[2,3-d]pyrimidin-2-ylamino)pyridin-3-yl)piperazin-1-yl)-N-(6-(cyanomethylamino)hexyl)acetamide ID: ALA4867557
PubChem CID: 164622792
Max Phase: Preclinical
Molecular Formula: C34H46N10O3
Molecular Weight: 642.81
Molecule Type: Unknown
Associated Items:
Names and Identifiers Canonical SMILES: CC(=O)c1c(C)c2cnc(Nc3ccc(N4CCN(CC(=O)NCCCCCCNCC#N)CC4)cn3)nc2n(C2CCCC2)c1=O
Standard InChI: InChI=1S/C34H46N10O3/c1-24-28-22-39-34(41-32(28)44(26-9-5-6-10-26)33(47)31(24)25(2)45)40-29-12-11-27(21-38-29)43-19-17-42(18-20-43)23-30(46)37-15-8-4-3-7-14-36-16-13-35/h11-12,21-22,26,36H,3-10,14-20,23H2,1-2H3,(H,37,46)(H,38,39,40,41)
Standard InChI Key: RCKGCMQHALMIGQ-UHFFFAOYSA-N
Molfile:
RDKit 2D
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35.9290 -11.3075 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
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36.6339 -10.0801 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
37.3406 -9.6699 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
36.6358 -10.8973 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
38.0493 -10.0768 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
38.7560 -9.6666 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
38.0512 -10.8940 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
39.4647 -10.0735 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
40.1714 -9.6633 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
40.8801 -10.0702 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
41.5869 -9.6599 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
42.2955 -10.0669 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
43.0023 -9.6566 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
45.8330 -10.4633 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
1 2 1 0
1 3 1 0
4 5 1 0
4 7 2 0
5 6 1 0
6 9 1 0
8 7 1 0
8 9 2 0
9 10 1 0
10 11 2 0
11 12 1 0
12 13 2 0
13 8 1 0
5 14 2 0
7 15 1 0
4 16 1 0
16 17 2 0
16 18 1 0
19 20 1 0
20 21 1 0
21 22 1 0
22 23 1 0
23 19 1 0
6 19 1 0
11 24 1 0
24 25 1 0
25 26 2 0
26 27 1 0
27 28 2 0
28 29 1 0
29 30 2 0
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38 40 2 0
39 41 1 0
41 42 1 0
42 43 1 0
43 44 1 0
44 45 1 0
45 46 1 0
46 3 1 0
2 47 3 0
M END Associated Targets(Human) Molecule Features Natural Product: NoOral: NoChemical Probe: NoParenteral: NoMolecule Type: UnknownTopical: NoFirst In Class: NoBlack Box: NoChirality: NoAvailability: NoProdrug: No
Drug Indications MESH ID MESH Heading EFO IDs EFO Terms Max Phase for Indication References
Mechanisms of Action Mechanism of Action Action Type target ID Target Name Target Type Target Organism Binding Site Name References
Calculated Properties Molecular Weight: 642.81Molecular Weight (Monoisotopic): 642.3754AlogP: 3.47#Rotatable Bonds: 15Polar Surface Area: 161.17Molecular Species: NEUTRALHBA: 12HBD: 3#RO5 Violations: 2HBA (Lipinski): 13HBD (Lipinski): 3#RO5 Violations (Lipinski): 2CX Acidic pKa: 11.34CX Basic pKa: 6.22CX LogP: 2.69CX LogD: 2.64Aromatic Rings: 3Heavy Atoms: 47QED Weighted: 0.13Np Likeness Score: -1.31
References 1. Shan H, Ma X, Yan G, Luo M, Zhong X, Lan S, Yang J, Liu Y, Pu C, Tong Y, Li R.. (2021) Discovery of a novel covalent CDK4/6 inhibitor based on palbociclib scaffold., 219 [PMID:33857728 ] [10.1016/j.ejmech.2021.113432 ]