1-(5-(4-((4-(4-(2-butyl-1-oxo-1,2-dihydro-2,7-naphthyridin-4-yl)-2-methoxyphenoxy)piperidin-1-yl)methyl)piperidine-1-carbonyl)-2-chlorophenyl)dihydropyrimidine-2,4(1H,3H)-dione

ID: ALA4868226

PubChem CID: 156178057

Max Phase: Preclinical

Molecular Formula: C41H47ClN6O6

Molecular Weight: 755.32

Molecule Type: Unknown

This compound is available for customization.

Associated Items:

Names and Identifiers

Canonical SMILES:  CCCCn1cc(-c2ccc(OC3CCN(CC4CCN(C(=O)c5ccc(Cl)c(N6CCC(=O)NC6=O)c5)CC4)CC3)c(OC)c2)c2ccncc2c1=O

Standard InChI:  InChI=1S/C41H47ClN6O6/c1-3-4-16-47-26-33(31-9-15-43-24-32(31)40(47)51)28-6-8-36(37(23-28)53-2)54-30-12-17-45(18-13-30)25-27-10-19-46(20-11-27)39(50)29-5-7-34(42)35(22-29)48-21-14-38(49)44-41(48)52/h5-9,15,22-24,26-27,30H,3-4,10-14,16-21,25H2,1-2H3,(H,44,49,52)

Standard InChI Key:  MQXFOTNUITWXQX-UHFFFAOYSA-N

Molfile:  

 
     RDKit          2D

 54 60  0  0  0  0  0  0  0  0999 V2000
    4.6500  -11.5438    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.6488  -12.3634    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3569  -12.7723    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3551  -11.1350    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0637  -11.5402    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0645  -12.3592    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7730  -12.7663    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4813  -12.3555    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4765  -11.5333    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.7674  -11.1300    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3526  -10.3178    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.9422  -11.1354    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9420  -10.3182    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2342   -9.9098    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.2340   -9.0926    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3596  -13.5855    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6512  -13.9952    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.6527  -14.8116    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3619  -15.2194    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0710  -14.8047    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0660  -13.9897    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9458  -15.2215    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.2373  -14.8142    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3649  -16.0365    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    6.0741  -16.4426    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0719  -17.2565    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7770  -17.6625    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.4856  -17.2548    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    7.4846  -16.4366    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7750  -16.0262    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.1933  -17.6635    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.9011  -17.2550    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.6041  -17.6667    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3097  -17.2617    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3140  -16.4442    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    9.6065  -16.0333    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.8947  -16.4400    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.0233  -16.0383    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.7294  -16.4497    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   11.0265  -15.2211    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.7339  -14.8180    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.7375  -14.0016    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.0308  -13.5894    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3192  -13.9996    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.3191  -14.8147    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.4442  -13.5987    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   13.1499  -14.0126    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.8573  -13.6106    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   13.8651  -12.7931    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.1594  -12.3792    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.4458  -12.7828    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.0329  -12.7722    0.0000 Cl  0  0  0  0  0  0  0  0  0  0  0  0
   13.1443  -14.8298    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   14.5761  -12.3903    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  2  0
  3  6  1  0
  5  4  1  0
  4  1  1  0
  5  6  2  0
  6  7  1  0
  7  8  2  0
  8  9  1  0
  9 10  2  0
 10  5  1  0
  4 11  2  0
  1 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 16 17  2  0
 17 18  1  0
 18 19  2  0
 19 20  1  0
 20 21  2  0
 21 16  1  0
  3 16  1  0
 18 22  1  0
 22 23  1  0
 19 24  1  0
 24 25  1  0
 25 26  1  0
 25 30  1  0
 26 27  1  0
 27 28  1  0
 28 29  1  0
 29 30  1  0
 28 31  1  0
 31 32  1  0
 32 33  1  0
 32 37  1  0
 33 34  1  0
 34 35  1  0
 35 36  1  0
 36 37  1  0
 35 38  1  0
 38 39  2  0
 38 40  1  0
 40 41  2  0
 41 42  1  0
 42 43  2  0
 43 44  1  0
 44 45  2  0
 45 40  1  0
 46 47  1  0
 46 51  1  0
 47 48  1  0
 48 49  1  0
 49 50  1  0
 50 51  1  0
 42 46  1  0
 43 52  1  0
 47 53  2  0
 49 54  2  0
M  END

Alternative Forms

  1. Parent:

    ALA4868226

    ---

Associated Targets(Human)

BRD9 Tchem Cereblon/Bromodomain-containing protein 9 (14 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: UnknownTopical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Calculated Properties

Molecular Weight: 755.32Molecular Weight (Monoisotopic): 754.3246AlogP: 6.37#Rotatable Bonds: 11
Polar Surface Area: 126.31Molecular Species: BASEHBA: 9HBD: 1
#RO5 Violations: 2HBA (Lipinski): 12HBD (Lipinski): 1#RO5 Violations (Lipinski): 3
CX Acidic pKa: 11.28CX Basic pKa: 9.26CX LogP: 3.67CX LogD: 1.81
Aromatic Rings: 4Heavy Atoms: 54QED Weighted: 0.19Np Likeness Score: -0.98

References

1. Sabnis RW..  (2021)  BRD9 Bifunctional Degraders for Treating Cancer.,  12  (12.0): [PMID:34917243] [10.1021/acsmedchemlett.1c00580]

Source