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N-(3-(3-(4-(6-(6-acetyl-8-cyclopentyl-5-methyl-7-oxo-7,8-dihydropyrido[2,3-d]pyrimidin-2-ylamino)pyridin-3-yl)piperazin-1-yl)propanamido)propyl)acrylamide ID: ALA4872623
PubChem CID: 164623523
Max Phase: Preclinical
Molecular Formula: C33H43N9O4
Molecular Weight: 629.77
Molecule Type: Unknown
Associated Items:
Names and Identifiers Canonical SMILES: C=CC(=O)NCCCNC(=O)CCN1CCN(c2ccc(Nc3ncc4c(C)c(C(C)=O)c(=O)n(C5CCCC5)c4n3)nc2)CC1
Standard InChI: InChI=1S/C33H43N9O4/c1-4-28(44)34-13-7-14-35-29(45)12-15-40-16-18-41(19-17-40)25-10-11-27(36-20-25)38-33-37-21-26-22(2)30(23(3)43)32(46)42(31(26)39-33)24-8-5-6-9-24/h4,10-11,20-21,24H,1,5-9,12-19H2,2-3H3,(H,34,44)(H,35,45)(H,36,37,38,39)
Standard InChI Key: XEYPGBRCMYQGQM-UHFFFAOYSA-N
Molfile:
RDKit 2D
46 50 0 0 0 0 0 0 0 0999 V2000
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29.2455 -11.7956 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
29.9508 -12.2001 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
29.9508 -10.5657 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
30.6561 -10.9784 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
30.6545 -11.7938 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
31.3587 -12.2011 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
32.0650 -11.7941 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
32.0627 -10.9756 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
31.3579 -10.5720 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
28.5384 -12.2052 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
29.9508 -9.7485 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
28.5366 -10.5719 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
28.5342 -9.7547 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
27.8301 -10.9826 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
29.9553 -13.0204 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
29.2949 -13.5017 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
29.5486 -14.2786 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
30.3658 -14.2774 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
30.6171 -13.4998 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
32.7731 -12.2020 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
33.4804 -11.7927 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
34.1869 -12.2032 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
34.8937 -11.7946 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
34.8933 -10.9765 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
34.1802 -10.5688 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
33.4763 -10.9798 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
35.6001 -10.5663 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
36.3087 -10.9732 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
35.5981 -9.7491 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
36.3049 -9.3389 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
37.0136 -9.7458 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
37.7203 -9.3355 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
37.0155 -10.5630 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
38.4290 -9.7425 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
39.1357 -9.3322 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
39.8444 -9.7392 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
39.1338 -8.5151 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
40.5511 -9.3289 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
41.2598 -9.7359 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
41.9666 -9.3256 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
42.6752 -9.7326 0.0000 N 0 0 0 0 0 0 0 0 0 0 0 0
43.3820 -9.3223 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
44.0906 -9.7293 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
44.7974 -9.3190 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0
43.3801 -8.5052 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0
1 2 1 0
1 4 2 0
2 3 1 0
3 6 1 0
5 4 1 0
5 6 2 0
6 7 1 0
7 8 2 0
8 9 1 0
9 10 2 0
10 5 1 0
2 11 2 0
4 12 1 0
1 13 1 0
13 14 2 0
13 15 1 0
16 17 1 0
17 18 1 0
18 19 1 0
19 20 1 0
20 16 1 0
3 16 1 0
8 21 1 0
21 22 1 0
22 23 2 0
23 24 1 0
24 25 2 0
25 26 1 0
26 27 2 0
27 22 1 0
25 28 1 0
28 29 1 0
28 30 1 0
30 31 1 0
29 34 1 0
31 32 1 0
32 33 1 0
32 34 1 0
33 35 1 0
35 36 1 0
36 37 1 0
36 38 2 0
37 39 1 0
39 40 1 0
40 41 1 0
41 42 1 0
42 43 1 0
43 44 1 0
44 45 2 0
43 46 2 0
M END Associated Targets(Human) Molecule Features Natural Product: NoOral: NoChemical Probe: NoParenteral: NoMolecule Type: UnknownTopical: NoFirst In Class: NoBlack Box: NoChirality: NoAvailability: NoProdrug: No
Drug Indications MESH ID MESH Heading EFO IDs EFO Terms Max Phase for Indication References
Mechanisms of Action Mechanism of Action Action Type target ID Target Name Target Type Target Organism Binding Site Name References
Calculated Properties Molecular Weight: 629.77Molecular Weight (Monoisotopic): 629.3438AlogP: 2.88#Rotatable Bonds: 13Polar Surface Area: 154.45Molecular Species: NEUTRALHBA: 11HBD: 3#RO5 Violations: 2HBA (Lipinski): 13HBD (Lipinski): 3#RO5 Violations (Lipinski): 2CX Acidic pKa: 11.34CX Basic pKa: 7.87CX LogP: 2.12CX LogD: 1.52Aromatic Rings: 3Heavy Atoms: 46QED Weighted: 0.15Np Likeness Score: -1.13
References 1. Shan H, Ma X, Yan G, Luo M, Zhong X, Lan S, Yang J, Liu Y, Pu C, Tong Y, Li R.. (2021) Discovery of a novel covalent CDK4/6 inhibitor based on palbociclib scaffold., 219 [PMID:33857728 ] [10.1016/j.ejmech.2021.113432 ]