(2S,5R)-3-Amino-6-hydroxymethyl-tetrahydro-pyran-2,4,5-triol

ID: ALA493287

Cas Number: 3416-24-8

PubChem CID: 439213

Product Number: G413437, Order Now?

Max Phase: Approved

Molecular Formula: C6H13NO5

Molecular Weight: 179.17

Molecule Type: Small molecule

Associated Items:

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Names and Identifiers

Synonyms: Chitosamine | Glucosamine | Mediflex | 2-Amino-2-Deoxy-D-Glucopyranose|2-Amino-2-Deoxy-D-Glucopyranoside|2-Amino-2-Deoxy-D-Glucose|2-Amino-2-Deoxy-Glucopyranose|2-Amino-2-Deoxy-Glucopyranoside|2-Amino-2-Deoxy-Glucose|2-Deoxy-2-Amino-D-Glucopyranose|2-Deoxy-2-Amino-D-Glucopyranoside|2-Deoxy-2-Amino-D-Glucose|2-Deoxy-2-Amino-Glucopyranose|2-Deoxy-2-Amino-Glucopyranoside|2-Deoxy-2-Amino-Glucose|D-GlcN|D-Glucosamine|GlcN|Glucosamine|chitosamine|Glucosamine free base|CHEBI:47977|(3R,4R,5S,6R)-3-aminoShow More

Synonyms from Alternative Forms(33): Glucosamine hydrochloride | Chitosamine hydrochloride | Cosamin | D-glucosamine hydrochloride | Glucosamine (as hydrochloride) | Glucosamine hcl | NSC-234443 | NSC-758 | Alateris | Ardern | Bio-health | Br pharm | Cozachew fizz | Cozachew fizz combi | Cozachew meltdown 1500 | Cozachew meltdown combi | Flexi-melt | Fosachew | Fosaveg | Glucosamine hcl meltdown | Gosachew | Gosaveg | Joint-flex daily | Pro coxam | Glucosamine sulfate potassium chloride | Glucosamine sulfate sodium chloride | Glucosamine sulf | Glucosamine sulfate salt | Faximin | Glucosamine sulfate | Tiocondramina | Dolenio | Glusartel

Canonical SMILES:  N[C@H]1C(O)O[C@H](CO)[C@@H](O)[C@@H]1O

Standard InChI:  InChI=1S/C6H13NO5/c7-3-5(10)4(9)2(1-8)12-6(3)11/h2-6,8-11H,1,7H2/t2-,3-,4-,5-,6?/m1/s1

Standard InChI Key:  MSWZFWKMSRAUBD-IVMDWMLBSA-N

Molfile:  

     RDKit          2D

 12 12  0  0  0  0  0  0  0  0999 V2000
    0.8949   -0.5095    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.6094   -0.9220    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1804   -0.9220    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1804   -1.7470    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5340   -0.5095    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2485   -0.9220    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5340    0.3155    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.2485    0.7280    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1804    0.7280    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8949    0.3155    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.1804    1.5530    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5340    1.9655    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  1  3  1  0
  1 10  1  0
  3  4  1  6
  3  5  1  0
  5  6  1  1
  5  7  1  0
  7  8  1  6
  7  9  1  0
  9 10  1  0
  9 11  1  1
 11 12  1  0
M  END

Associated Targets(Human)

MG-63 (795 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
SLC22A1 Tchem Solute carrier family 22 member 1 (646 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
MMP2 Tchem Matrix metalloproteinase-2 (6627 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
MMP9 Tchem Matrix metalloproteinase 9 (6779 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
HT-1080 (3966 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
MDA-MB-231 (73002 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
FIBCD1 Tbio Fibrinogen C domain-containing protein 1 (33 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
DRD1 Tclin Dopamine D1 receptor (9720 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
KCNH2 Tclin HERG (29587 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
SLC6A3 Tclin Dopamine transporter (10535 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
ESR1 Tclin Estrogen receptor alpha (17718 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
ACHE Tclin Acetylcholinesterase (18204 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
SLC6A2 Tclin Norepinephrine transporter (10102 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
SLC6A4 Tclin Serotonin transporter (12625 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
ADRA2A Tclin Alpha-2a adrenergic receptor (9450 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
OPRM1 Tclin Mu opioid receptor (19785 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
MAOA Tclin Monoamine oxidase A (11911 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
HTR1A Tclin Serotonin 1a (5-HT1a) receptor (14969 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
KDR Tclin Vascular endothelial growth factor receptor 2 (20924 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
PDE3A Tclin Phosphodiesterase 3A (3309 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
DRD3 Tclin Dopamine D3 receptor (14368 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
CHRM2 Tclin Muscarinic acetylcholine receptor M2 (10671 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
F2 Tclin Thrombin (11687 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
TBXA2R Tclin Thromboxane A2 receptor (5717 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
ADORA3 Tchem Adenosine A3 receptor (15931 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
HRH3 Tclin Histamine H3 receptor (10389 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
HTR2B Tclin Serotonin 2b (5-HT2b) receptor (10323 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
GABRA1 Tclin Gamma-aminobutyric acid receptor subunit alpha-1/alpha-2/beta-2/gamma-2 (1034 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
AR Tclin Androgen Receptor (11781 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
PGR Tclin Progesterone receptor (8562 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
PTGS1 Tclin Cyclooxygenase-1 (9233 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
PDE4A Tclin Phosphodiesterase 4A (1943 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
ADRA1A Tclin Alpha-1a adrenergic receptor (8359 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
CHRM1 Tclin Muscarinic acetylcholine receptor M1 (12690 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Associated Targets(non-human)

Rattus norvegicus (775804 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
RAW (181 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
RAW264.7 (28094 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Cartilage (29 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Poria (18 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Trametes versicolor (86 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
SARS-CoV-2 (38078 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: YesOral: NoChemical Probe: NoParenteral: No
Molecule Type: Small moleculeTopical: NoFirst In Class: NoBlack Box: No
Chirality: YesAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Calculated Properties

Molecular Weight: 179.17Molecular Weight (Monoisotopic): 179.0794AlogP: -3.25#Rotatable Bonds: 1
Polar Surface Area: 116.17Molecular Species: NEUTRALHBA: 6HBD: 5
#RO5 Violations: HBA (Lipinski): 6HBD (Lipinski): 6#RO5 Violations (Lipinski): 1
CX Acidic pKa: 11.73CX Basic pKa: 8.23CX LogP: -3.04CX LogD: -3.93
Aromatic Rings: Heavy Atoms: 12QED Weighted: 0.29Np Likeness Score: 2.14

References

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3. Nishioka H, Kishioka T, Iida C, Fujii K, Ichi I, Kojo S..  (2006)  Activation of mitogen activated protein kinase (MAPK) during D-galactosamine intoxication in the rat liver.,  16  (11): [PMID:16530410] [10.1016/j.bmcl.2006.02.057]
4. Kim MM, Mendis E, Rajapakse N, Kim SK..  (2007)  Glucosamine sulfate promotes osteoblastic differentiation of MG-63 cells via anti-inflammatory effect.,  17  (7): [PMID:17270442] [10.1016/j.bmcl.2007.01.030]
5. Singh S, Khajuria A, Taneja SC, Khajuria RK, Singh J, Qazi GN..  (2007)  Boswellic acids and glucosamine show synergistic effect in preclinical anti-inflammatory study in rats.,  17  (13): [PMID:17481895] [10.1016/j.bmcl.2007.04.034]
6. Ahlin G, Karlsson J, Pedersen JM, Gustavsson L, Larsson R, Matsson P, Norinder U, Bergström CA, Artursson P..  (2008)  Structural requirements for drug inhibition of the liver specific human organic cation transport protein 1.,  51  (19): [PMID:18788725] [10.1021/jm8003152]
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8. Mendis E, Kim MM, Rajapakse N, Kim SK..  (2008)  Suppression of cytokine production in lipopolysaccharide-stimulated mouse macrophages by novel cationic glucosamine derivative involves down-regulation of NF-kappaB and MAPK expressions.,  16  (18): [PMID:18786831] [10.1016/j.bmc.2008.08.037]
9. Mendis E, Kim MM, Rajapakse N, Kim SK..  (2009)  The inhibitory mechanism of a novel cationic glucosamine derivative against MMP-2 and MMP-9 expressions.,  19  (10): [PMID:19375915] [10.1016/j.bmcl.2009.03.126]
10. Pelletier DJ, Gehlhaar D, Tilloy-Ellul A, Johnson TO, Greene N..  (2007)  Evaluation of a published in silico model and construction of a novel Bayesian model for predicting phospholipidosis inducing potential.,  47  (1): [PMID:17428028] [10.1021/ci6004542]
11. Lowe R, Glen RC, Mitchell JB..  (2010)  Predicting phospholipidosis using machine learning.,  (5): [PMID:20799726] [10.1021/mp100103e]
12. Greene N, Fisk L, Naven RT, Note RR, Patel ML, Pelletier DJ..  (2010)  Developing structure-activity relationships for the prediction of hepatotoxicity.,  23  (7): [PMID:20553011] [10.1021/tx1000865]
13. Greene N, Fisk L, Naven RT, Note RR, Patel ML, Pelletier DJ..  (2010)  Developing structure-activity relationships for the prediction of hepatotoxicity.,  23  (7): [PMID:20553011] [10.1021/tx1000865]
14. Ekins S, Williams AJ, Xu JJ..  (2010)  A predictive ligand-based Bayesian model for human drug-induced liver injury.,  38  (12): [PMID:20843939] [10.1124/dmd.110.035113]
15. Fourches D, Barnes JC, Day NC, Bradley P, Reed JZ, Tropsha A..  (2010)  Cheminformatics analysis of assertions mined from literature that describe drug-induced liver injury in different species.,  23  (1): [PMID:20014752] [10.1021/tx900326k]
16. Serpi M, Bibbo R, Rat S, Roberts H, Hughes C, Caterson B, Alcaraz MJ, Gibert AT, Verson CR, McGuigan C..  (2012)  Novel phosphoramidate prodrugs of N-acetyl-(D)-glucosamine with antidegenerative activity on bovine and human cartilage explants.,  55  (10): [PMID:22501024] [10.1021/jm300074y]
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18. Muhizi T, Coma V, Grelier S..  (2011)  Synthesis of D-glucosamine quaternary ammonium derivatives and evaluation of their antifungal activity together with aminodeoxyglucose derivatives against two wood fungi Coriolus versicolor and Poria placenta: structure-activity relationships.,  67  (3): [PMID:21308954] [10.1002/ps.2063]
19. Boyd RE, Lee G, Rybczynski P, Benjamin ER, Khanna R, Wustman BA, Valenzano KJ..  (2013)  Pharmacological chaperones as therapeutics for lysosomal storage diseases.,  56  (7): [PMID:23363020] [10.1021/jm301557k]
20. Punganuru SR, Mostofa AG, Madala HR, Basak D, Srivenugopal KS..  (2016)  Potent anti-proliferative actions of a non-diuretic glucosamine derivative of ethacrynic acid.,  26  (12): [PMID:27156773] [10.1016/j.bmcl.2016.04.062]
21. WHO Anatomical Therapeutic Chemical Classification, 
22. Unpublished dataset, 
23. Katie Heiser, Peter F. McLean, Chadwick T. Davis, Ben Fogelson, Hannah B. Gordon, Pamela Jacobson, Brett Hurst, Ben Miller, Ronald W. Alfa, Berton A. Earnshaw, Mason L. Victors, Yolanda T. Chong, Imran S. Haque, Adeline S. Low, Christopher C. Gibson.  (2020)  Identification of potential treatments for COVID-19 through artificial intelligence-enabled phenomic analysis of human cells infected with SARS-CoV-2,  [10.1101/2020.04.21.054387]
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