Bis(8-acetylenyl-6-phenyl-4H-benzo[f]imidazo[1,5-a][1,4]diazepine-3-carboxy) diethylene glycol diester

ID: ALA499964

PubChem CID: 21065279

Max Phase: Preclinical

Molecular Formula: C44H32N6O5

Molecular Weight: 724.78

Molecule Type: Small molecule

This compound is available for customization.

Associated Items:

Names and Identifiers

Canonical SMILES:  C#Cc1ccc2c(c1)C(c1ccccc1)=NCc1c(C(=O)OCCOCCOC(=O)c3ncn4c3CN=C(c3ccccc3)c3cc(C#C)ccc3-4)ncn1-2

Standard InChI:  InChI=1S/C44H32N6O5/c1-3-29-15-17-35-33(23-29)39(31-11-7-5-8-12-31)45-25-37-41(47-27-49(35)37)43(51)54-21-19-53-20-22-55-44(52)42-38-26-46-40(32-13-9-6-10-14-32)34-24-30(4-2)16-18-36(34)50(38)28-48-42/h1-2,5-18,23-24,27-28H,19-22,25-26H2

Standard InChI Key:  NSTKOSLZMSLHPO-UHFFFAOYSA-N

Molfile:  

     RDKit          2D

 55 62  0  0  0  0  0  0  0  0999 V2000
   16.0293  -16.9355    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.7088  -17.6974    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.8906  -17.7995    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.5346  -16.2789    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.3952  -17.1376    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.7172  -16.3774    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.5940  -17.3592    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.9222  -16.8706    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   12.8875  -16.0411    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.3277  -15.6420    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   13.5095  -15.4942    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.3972  -14.6703    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.1461  -14.3088    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   14.7211  -14.9095    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.6703  -14.2777    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.9695  -14.7114    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   12.6449  -13.4539    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   16.2066  -18.3542    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.7113  -19.0083    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.2435  -14.3215    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.5428  -14.7554    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.6511  -16.9562    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9789  -17.7150    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7980  -17.8094    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1395  -16.2950    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.2871  -17.1427    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9578  -16.3857    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.0903  -17.3567    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.7575  -16.8617    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.7842  -16.0319    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.3403  -15.6466    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.1571  -15.4909    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2615  -14.6660    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.5092  -14.3117    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.9400  -14.9178    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.9846  -14.2665    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.6895  -14.6936    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.0021  -13.4425    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.4874  -18.3766    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9890  -19.0354    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.4117  -14.2968    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.1166  -14.7238    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.8390  -14.3270    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   13.4469  -18.1701    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.2451  -18.1662    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6189  -18.7016    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.7732  -19.5105    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5523  -19.7818    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.1775  -19.2382    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0200  -18.4313    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.6694  -18.4434    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.5222  -19.2536    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.1513  -19.7874    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.9302  -19.5054    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.0738  -18.6959    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  6 10  1  0
 26 27  1  0
 27 31  1  0
 11 12  2  0
 26 28  1  0
 12 13  1  0
 28 29  2  0
 13 14  2  0
 32 30  1  0
 29 30  1  0
 31 32  1  0
 14 10  1  0
  3  5  2  0
  5  7  1  0
  1  2  2  0
 15 16  1  0
 32 33  2  0
 33 34  1  0
 34 35  2  0
 35 31  1  0
 15 17  2  0
 12 15  1  0
  7  8  2  0
 36 37  1  0
 36 38  2  0
 33 36  1  0
  2 18  1  0
 23 39  1  0
  6  4  2  0
 39 40  3  0
 18 19  3  0
 37 41  1  0
 11  9  1  0
 41 42  1  0
 16 20  1  0
 42 43  1  0
 43 21  1  0
  8  9  1  0
  7 44  1  0
 20 21  1  0
 28 45  1  0
 10 11  1  0
 45 46  2  0
  4  1  1  0
 46 47  1  0
 22 23  2  0
 47 48  2  0
 48 49  1  0
 23 24  1  0
 49 50  2  0
 50 45  1  0
 24 26  2  0
 44 51  2  0
  2  3  1  0
 51 52  1  0
 27 25  2  0
 52 53  2  0
 25 22  1  0
 53 54  1  0
  5  6  1  0
 54 55  2  0
 55 44  1  0
M  END

Associated Targets(Human)

GABRG2 Tclin GABA-A receptor; alpha-6/beta-3/gamma-2 (367 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
GABRG2 Tclin GABA-A receptor; alpha-5/beta-3/gamma-2 (1334 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
GABRG2 Tclin GABA A receptor alpha-4/beta-3/gamma-2 (109 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
GABRA3 Tclin GABA receptor alpha-3 subunit (187 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
GABRG2 Tclin GABA-A receptor; alpha-2/beta-3/gamma-2 (949 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
GABRA1 Tclin GABA-A receptor; alpha-1/beta-3/gamma-2 (1565 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: Small moleculeTopical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Calculated Properties

Molecular Weight: 724.78Molecular Weight (Monoisotopic): 724.2434AlogP: 5.75#Rotatable Bonds: 10
Polar Surface Area: 122.19Molecular Species: NEUTRALHBA: 11HBD:
#RO5 Violations: 3HBA (Lipinski): 11HBD (Lipinski): #RO5 Violations (Lipinski): 3
CX Acidic pKa: CX Basic pKa: 5.10CX LogP: 6.67CX LogD: 6.67
Aromatic Rings: 6Heavy Atoms: 55QED Weighted: 0.10Np Likeness Score: -0.40

References

1. Han D, Holger Försterling F, Li X, Deschamps JR, Parrish D, Cao H, Rallapalli S, Clayton T, Teng Y, Majumder S, Sankar S, Roth BL, Sieghart W, Furtmuller R, Rowlett JK, Weed MR, Cook JM..  (2008)  A study of the structure-activity relationship of GABA(A)-benzodiazepine receptor bivalent ligands by conformational analysis with low temperature NMR and X-ray analysis.,  16  (19): [PMID:18790643] [10.1016/j.bmc.2008.08.072]

Source