1,3,6,8-tetrahydroxy-9H-xanthen-9-one

ID: ALA505898

Chembl Id: CHEMBL505898

PubChem CID: 5377571

Max Phase: Preclinical

Molecular Formula: C13H8O6

Molecular Weight: 260.20

Molecule Type: Small molecule

Associated Items:

Names and Identifiers

Canonical SMILES:  O=c1c2c(O)cc(O)cc2oc2cc(O)cc(O)c12

Standard InChI:  InChI=1S/C13H8O6/c14-5-1-7(16)11-9(3-5)19-10-4-6(15)2-8(17)12(10)13(11)18/h1-4,14-17H

Standard InChI Key:  CMBUJUMLPKDEOH-UHFFFAOYSA-N

Alternative Forms

Associated Targets(Human)

MGAM Tclin Alpha glucosidase (860 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Associated Targets(non-human)

Staphylococcus aureus (210822 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Bacillus subtilis (32866 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Klebsiella pneumoniae (43867 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Escherichia coli (133304 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Bacillus cereus (7522 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: YesOral: NoChemical Probe: NoParenteral: No
Molecule Type: Small moleculeTopical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Calculated Properties

Molecular Weight: 260.20Molecular Weight (Monoisotopic): 260.0321AlogP: 1.77#Rotatable Bonds: 0
Polar Surface Area: 111.13Molecular Species: NEUTRALHBA: 6HBD: 4
#RO5 Violations: 0HBA (Lipinski): 6HBD (Lipinski): 4#RO5 Violations (Lipinski): 0
CX Acidic pKa: 7.22CX Basic pKa: CX LogP: 3.05CX LogD: 2.56
Aromatic Rings: 3Heavy Atoms: 19QED Weighted: 0.46Np Likeness Score: 1.22

References

1. Liu Y, Ke Z, Cui J, Chen WH, Ma L, Wang B..  (2008)  Synthesis, inhibitory activities, and QSAR study of xanthone derivatives as alpha-glucosidase inhibitors.,  16  (15): [PMID:18632275] [10.1016/j.bmc.2008.06.043]
2. Li GL, He JY, Zhang A, Wan Y, Wang B, Chen WH..  (2011)  Toward potent α-glucosidase inhibitors based on xanthones: a closer look into the structure-activity correlations.,  46  (9): [PMID:21708415] [10.1016/j.ejmech.2011.06.003]
3. Wang R, Chen R, Li J, Liu X, Xie K, Chen D, Peng Y, Dai J..  (2016)  Regiospecific Prenylation of Hydroxyxanthones by a Plant Flavonoid Prenyltransferase.,  79  (8): [PMID:27466696] [10.1021/acs.jnatprod.6b00417]
4. Kodama T, Ito T, Dibwe DF, Woo SY, Morita H..  (2017)  Syntheses of benzophenone-xanthone hybrid polyketides and their antibacterial activities.,  27  (11): [PMID:28416134] [10.1016/j.bmcl.2017.04.017]
5. Lin S, Koh JJ, Aung TT, Lim F, Li J, Zou H, Wang L, Lakshminarayanan R, Verma C, Wang Y, Tan DT, Cao D, Beuerman RW, Ren L, Liu S..  (2017)  Symmetrically Substituted Xanthone Amphiphiles Combat Gram-Positive Bacterial Resistance with Enhanced Membrane Selectivity.,  60  (4): [PMID:28122182] [10.1021/acs.jmedchem.6b01403]
6. Santos CMM, Freitas M, Fernandes E..  (2018)  A comprehensive review on xanthone derivatives as α-glucosidase inhibitors.,  157  [PMID:30282319] [10.1016/j.ejmech.2018.07.073]

Source