Kumemicinone E

ID: ALA5170935

Chembl Id: CHEMBL5170935

PubChem CID: 168270580

Max Phase: Preclinical

Molecular Formula: C38H40O12

Molecular Weight: 688.73

Associated Items:

Names and Identifiers

Canonical SMILES:  CC1=C[C@@H](O)[C@H]2[C@](O)(CC[C@]3(Oc4cccc5c4C(=O)[C@]46CC[C@]7(O)CC(C)=C[C@@H](O)[C@@H]7[C@]4(O6)[C@H]5O)C(=O)c4c(O)cccc4[C@H](O)[C@@]23O)C1

Standard InChI:  InChI=1S/C38H40O12/c1-17-13-22(40)27-33(46,15-17)9-11-35(31(44)25-19(5-3-7-21(25)39)29(42)37(27,35)48)49-24-8-4-6-20-26(24)32(45)36-12-10-34(47)16-18(2)14-23(41)28(34)38(36,50-36)30(20)43/h3-8,13-14,22-23,27-30,39-43,46-48H,9-12,15-16H2,1-2H3/t22-,23-,27+,28+,29+,30+,33+,34+,35+,36-,37+,38+/m1/s1

Standard InChI Key:  SLVXVZDERJJYKZ-HNUPLIDOSA-N

Alternative Forms

  1. Parent:

    ALA5170935

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Associated Targets(non-human)

Kocuria rhizophila (337 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Staphylococcus aureus (210822 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Escherichia coli (133304 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Agrobacterium tumefaciens (620 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Tenacibaculum maritimum (10 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Candida albicans (78123 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: Topical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Calculated Properties

Molecular Weight: 688.73Molecular Weight (Monoisotopic): 688.2520AlogP: 1.61#Rotatable Bonds: 2
Polar Surface Area: 217.74Molecular Species: NEUTRALHBA: 12HBD: 8
#RO5 Violations: 3HBA (Lipinski): 12HBD (Lipinski): 8#RO5 Violations (Lipinski): 3
CX Acidic pKa: 8.45CX Basic pKa: CX LogP: 0.72CX LogD: 0.68
Aromatic Rings: 2Heavy Atoms: 50QED Weighted: 0.17Np Likeness Score: 1.37

References

1. Zhang Z, In Y, Fukaya K, Yang T, Harunari E, Urabe D, Imada C, Oku N, Igarashi Y..  (2022)  Kumemicinones A-G, Cytotoxic Angucyclinones from a Deep Sea-Derived Actinomycete of the Genus Actinomadura.,  85  (4.0): [PMID:35343685] [10.1021/acs.jnatprod.1c01205]

Source