6-(((2-((3-fluoro-7-oxo-4,5-dihydro-7H-pyrrolo[3,2,1-de][1,5]naphthyridin-4-yl)methyl)-trans-1,3-dioxan-5-yl)amino)methyl)-2H-pyrido[3,2-b][1,4]oxazin-3(4H)-one

ID: ALA5183589

PubChem CID: 168284143

Max Phase: Preclinical

Molecular Formula: C23H22FN5O5

Molecular Weight: 467.46

Names and Identifiers

Canonical SMILES:  O=C1COc2ccc(CN[C@H]3CO[C@H](CC4Cn5c(=O)ccc6ncc(F)c4c65)OC3)nc2N1

Standard InChI:  InChI=1S/C23H22FN5O5/c24-15-7-26-16-2-4-19(31)29-8-12(21(15)22(16)29)5-20-33-9-14(10-34-20)25-6-13-1-3-17-23(27-13)28-18(30)11-32-17/h1-4,7,12,14,20,25H,5-6,8-11H2,(H,27,28,30)/t12?,14-,20-

Standard InChI Key:  DTODKLZFABOOOA-CWJUMGKGSA-N

Molfile:  

 
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M  END

Alternative Forms

1. Parent:

   

   ALA5183589

   ---

Molecule Features

Natural Product: No

Oral: No

Chemical Probe: No

Parenteral: No

Molecule Type:

Topical: No

First In Class: No

Black Box: No

Chirality: No

Availability: No

Prodrug: No

Calculated Properties

Molecular Weight: 467.46

Molecular Weight (Monoisotopic): 467.1605

AlogP: 1.28

#Rotatable Bonds: 5

Polar Surface Area: 116.60

Molecular Species: NEUTRAL

HBA: 9

HBD: 2

#RO5 Violations: ┄

HBA (Lipinski): 10

HBD (Lipinski): 2

#RO5 Violations (Lipinski): ┄

CX Acidic pKa: 11.06

CX Basic pKa: 6.95

CX LogP: 0.21

CX LogD: 0.08

Aromatic Rings: 3

Heavy Atoms: 34

QED Weighted: 0.58

Np Likeness Score: -0.44

References

1. Lu Y, Mann CA, Nolan S, Collins JA, Parker E, Papa J, Vibhute S, Jahanbakhsh S, Thwaites M, Hufnagel D, Hazbón MH, Moreno J, Stedman TT, Wittum T, Wozniak DJ, Osheroff N, Yalowich JC, Mitton-Fry MJ..  (2022)  1,3-Dioxane-Linked Novel Bacterial Topoisomerase Inhibitors: Expanding Structural Diversity and the Antibacterial Spectrum.,  13  (6.0): [PMID:35707162] [10.1021/acsmedchemlett.2c00111]

Source

Source(1):

• Scientific Literature