ID: ALA5195919

PubChem CID: 168284332

Max Phase: Preclinical

Molecular Formula: C55H68N8O14

Molecular Weight: 1065.19

Associated Items:

This compound is not in our inventory system

Names and Identifiers

Canonical SMILES:  CO[C@H]1/C=C/O[C@@]2(C)Oc3c(C)c(O)c4c(O)c(c5c(nc6ccc(CCC(=O)N7CCN(CCn8c([N+](=O)[O-])cnc8C)CC7)cn65)c4c3C2=O)NC(=O)/C(C)=C\C=C\[C@H](C)[C@H](O)[C@@H](C)[C@@H](O)[C@@H](C)[C@H](OC(C)=O)[C@@H]1C

Standard InChI:  InChI=1S/C55H68N8O14/c1-28-12-11-13-29(2)54(71)58-45-46-44(57-38-16-14-36(27-62(38)46)15-17-40(65)60-22-19-59(20-23-60)21-24-61-34(7)56-26-39(61)63(72)73)41-42(50(45)69)49(68)33(6)52-43(41)53(70)55(9,77-52)75-25-18-37(74-10)30(3)51(76-35(8)64)32(5)48(67)31(4)47(28)66/h11-14,16,18,25-28,30-32,37,47-48,51,66-69H,15,17,19-24H2,1-10H3,(H,58,71)/b12-11+,25-18+,29-13-/t28-,30+,31+,32+,37-,47-,48+,51+,55-/m0/s1

Standard InChI Key:  RKFQIEIBAJQDSP-XKDIRLSASA-N

Molfile:  

 
     RDKit          2D

 77 84  0  0  0  0  0  0  0  0999 V2000
   -3.8083    0.6872    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5204    1.1038    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1354    0.5595    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.8000   -0.1910    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.9435   -0.1972    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.4316   -0.7248    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6707   -0.1777    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6644    0.6952    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9422    1.1015    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9363    1.9247    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2225    2.3437    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2166    3.1667    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5027    3.5732    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4968    4.3964    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7788    4.8029    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0708    4.3861    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0767    3.5631    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3572    4.7926    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6410    4.3759    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9229    4.7823    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2192    4.3656    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2251    3.5426    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9348    3.1359    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9406    2.3129    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6587    1.8940    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3749    2.3232    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0801    1.9167    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7883    2.3333    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0825    2.7523    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5144    1.9394    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2240    1.5329    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0860    1.0937    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3742    0.6771    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6646    1.0832    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3689    3.1588    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.6470    3.5528    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    0.4868    3.1258    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3513    5.6158    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7730    5.6259    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.2130    4.8130    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7906    3.1565    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.9244    3.5835    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6465    3.1770    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3545    3.5936    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6525    2.3538    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.5085    2.7626    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.6583    1.5432    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   -7.3662    1.9599    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4310   -0.9295    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2072   -0.1232    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0590    0.5339    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3944   -0.2117    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2456    0.6163    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.2324   -0.0469    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1028   -0.7926    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9163   -0.8750    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0555   -0.0469    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.4671   -0.7598    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2902   -0.7598    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7018   -1.4726    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.7018   -0.0469    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    3.5248   -1.4726    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9363   -2.1854    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5248   -2.8982    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    2.7017   -2.8982    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2902   -2.1854    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9363   -3.6110    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.7594   -3.6110    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.1710   -4.3238    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    5.9891   -4.4098    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.1602   -5.2146    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.4477   -5.6259    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    4.8364   -5.0754    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.0413   -5.2884    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.5711   -3.8278    0.0000 N   0  0  0  0  0  0  0  0  0  0  0  0
    6.3581   -3.0327    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
    7.3662   -4.0408    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
  2  1  1  0
  3  2  1  0
  4  3  1  0
  5  1  1  0
  4  5  1  0
  6  5  2  0
  7  4  1  0
  8  7  1  0
  9  8  2  0
 10  9  1  0
 11 10  1  0
 12 11  1  0
 13 12  1  0
 14 13  1  0
 15 14  1  0
 16 15  1  0
 16 17  1  6
 16 18  1  0
 18 19  1  0
 19 20  2  0
 20 21  1  0
 21 22  2  0
 22 23  1  0
 23 24  1  0
 24 25  1  0
 25 26  2  0
 26 27  1  0
 28 27  2  0
 29 28  1  0
 30  2  2  0
 30 28  1  0
 31 30  1  0
 27 32  1  0
 32  1  2  0
 33 32  1  0
 33 34  2  0
 25 34  1  0
 35 26  1  0
 36 23  2  0
 37 22  1  0
 18 38  1  1
 15 39  1  6
 14 40  1  6
 13 41  1  1
 12 42  1  1
 43 42  1  0
 44 43  2  0
 45 43  1  0
 11 46  1  6
 10 47  1  6
 48 47  1  0
  4 49  1  6
 33 50  1  0
 34 51  1  0
 51 52  1  0
 52 50  2  0
 51 53  1  0
 54 53  2  0
 55 54  1  0
 56 55  2  0
 52 56  1  0
 54 57  1  0
 57 58  1  0
 58 59  1  0
 59 60  1  0
 59 61  2  0
 62 60  1  0
 63 62  1  0
 64 63  1  0
 65 64  1  0
 66 65  1  0
 60 66  1  0
 64 67  1  0
 67 68  1  0
 68 69  1  0
 70 69  1  0
 70 71  2  0
 71 72  1  0
 72 73  2  0
 73 69  1  0
 73 74  1  0
 70 75  1  0
 75 76  1  0
 75 77  2  0
M  CHG  2  75   1  76  -1
M  END

Alternative Forms

  1. Parent:

    ALA5195919

    ---

Associated Targets(non-human)

Clostridioides difficile (2968 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Helicobacter pylori (3113 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: Topical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Calculated Properties

Molecular Weight: 1065.19Molecular Weight (Monoisotopic): 1064.4855AlogP: #Rotatable Bonds:
Polar Surface Area: Molecular Species: HBA: HBD:
#RO5 Violations: HBA (Lipinski): HBD (Lipinski): #RO5 Violations (Lipinski):
CX Acidic pKa: CX Basic pKa: CX LogP: CX LogD:
Aromatic Rings: Heavy Atoms: QED Weighted: Np Likeness Score:

References

1. Ma Z, He S, Yuan Y, Zhuang Z, Liu Y, Wang H, Chen J, Xu X, Ding C, Molodtsov V, Lin W, Robertson GT, Weiss WJ, Pulse M, Nguyen P, Duncan L, Doyle T, Ebright RH, Lynch AS..  (2022)  Design, Synthesis, and Characterization of TNP-2198, a Dual-Targeted Rifamycin-Nitroimidazole Conjugate with Potent Activity against Microaerophilic and Anaerobic Bacterial Pathogens.,  65  (6.0): [PMID:35175750] [10.1021/acs.jmedchem.1c02045]

Source