5'-O-[4-Deoxy-N-[(3S)-hexahydro-2-oxo-1H-azepin-3-yl]-beta-L-erythro-hex-4-enopyranuronamidosyl]-uridine

ID: ALA5220850

Chembl Id: CHEMBL5220850

PubChem CID: 168298166

Max Phase: Preclinical

Molecular Formula: C21H28N4O11

Molecular Weight: 512.47

Associated Items:

Names and Identifiers

Canonical SMILES:  O=C(N[C@H]1CCCCNC1=O)C1=C[C@H](O)[C@H](O)[C@@H](OC[C@H]2O[C@@H](n3ccc(=O)[nH]c3=O)[C@H](O)[C@@H]2O)O1

Standard InChI:  InChI=1S/C21H28N4O11/c26-10-7-11(18(32)23-9-3-1-2-5-22-17(9)31)36-20(14(10)28)34-8-12-15(29)16(30)19(35-12)25-6-4-13(27)24-21(25)33/h4,6-7,9-10,12,14-16,19-20,26,28-30H,1-3,5,8H2,(H,22,31)(H,23,32)(H,24,27,33)/t9-,10-,12+,14-,15+,16+,19+,20-/m0/s1

Standard InChI Key:  TWEXFMKOAOBDMR-RCELOXIMSA-N

Alternative Forms

  1. Parent:

    ALA5220850

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Associated Targets(non-human)

mraY Phospho-N-acetylmuramoyl-pentapeptide-transferase (78 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Mycobacterium tuberculosis (203094 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Mycolicibacterium smegmatis (8003 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Enterococcus faecium (13803 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Staphylococcus aureus (210822 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Klebsiella pneumoniae (43867 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Acinetobacter baumannii (41033 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Pseudomonas aeruginosa (123386 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID
Enterobacter sp. (336 Activities)
Activity TypeRelationActivity valueUnitsAction TypeJournalPubMed IddoiAssay Aladdin ID

Molecule Features

Natural Product: NoOral: NoChemical Probe: NoParenteral: No
Molecule Type: Topical: NoFirst In Class: NoBlack Box: No
Chirality: NoAvailability: NoProdrug: No

Drug Indications

MESH IDMESH Heading EFO IDsEFO TermsMax Phase for IndicationReferences

Mechanisms of Action

Mechanism of ActionAction Typetarget IDTarget NameTarget TypeTarget OrganismBinding Site NameReferences

Calculated Properties

Molecular Weight: 512.47Molecular Weight (Monoisotopic): 512.1755AlogP: -4.08#Rotatable Bonds: 6
Polar Surface Area: 221.67Molecular Species: NEUTRALHBA: 12HBD: 7
#RO5 Violations: 3HBA (Lipinski): 15HBD (Lipinski): 7#RO5 Violations (Lipinski): 3
CX Acidic pKa: 9.70CX Basic pKa: CX LogP: -3.75CX LogD: -3.76
Aromatic Rings: 1Heavy Atoms: 36QED Weighted: 0.19Np Likeness Score: 0.96

References

1. Kusaka S, Yamamoto K, Shinohara M, Minato Y, Ichikawa S..  (2022)  Synthesis of capuramycin and its analogues via a Ferrier-type I reaction and their biological evaluation.,  73  [PMID:36191548] [10.1016/j.bmc.2022.117011]

Source